Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00078 ATGAAGAACATTTTCAAGAAGCTTCACAAAGGAATTTCTGTTCAGAACTCTAGCTTCACTCCGGCGAGTCCTTCGTCTTCTTCGCCGTCACCCGTGACTGTTCAAGGTGGTGGAGCTTTAAATACTACATCATTGAATGCGGCAAAGCTGCAGGATTATTTTACTTCTGAGGAGGAATTTCAGTACCAGCTTGCCCTAGCGATTAGTGCTTCCAATTCGGAGTTTCGGGATGATTCCGAGAACGATCAGATCCGAACTGCCACTCTCTTGAGCTTGGGAGGTCATCGAATTGAATCCGTAAGGGATAAATCTGAAGCTGCAGAAGCCTTGTCCAGGCAGTATTGGGAATATAATGTACTTGACTATGAAGAAAAAGTTGTAGATGGTTTCTACGATGTATATAGATTATCCACAGAACCAGCATGGCAAGGAAAGATGCCTTCTCTCTCAGAACTTGAGGCAAATCAAGGGCGTTCCAGTTTTGAAGTTGTAATAGTTAATCTAGCAGTTGATCCTGCACTAGAAGAACTACTTCAAGTTGCTCACTGTATTGCACTAGACTGTCCTGTGGCCGAGGTTAGTGTTTTGGTACAGAGGCTCGCTGAACTTGTTACGGGCCATATGGGTGGTCCGGTGAAGGATGCTAATATCATGTTGGCCAGTTGGATGGAAAGAAGTACAGAATTGAGGACATCTCTACATACAAGTGTGTTTCCTATTGGTTCCATAAATATCGGGCTCTCAAGACATCGTGCGTTGCTCTTCAAGGTAATAGCTGATCACATCAAGTTGCCTTGTAGACTTGTCAAAGGGAGTCACTATACTGGCGTGGAGGACGATGCAATCAATATAGTAAAGTTGAAGGATGAAAGGGAATTCCTGGTTGATCTCATGGCTGCACCTGGAACCCTTATACCTGCTGATATATTAAGTATGAAGGAAACTGTACTTAATCCATACAATCCCAGAGTTATGAAAACTCCAAGTTTCCCACCCTCCAATGATCCGAGGTTTTCGTACTCAAGACCAATACCATCACATGGTGAAGGATGTAGCACAAATCCTGTGGTTGCTAGTAATTTGCCTTTAGACAGGAGATTTTGTTATGAAAACTCAGACTCTCTGATTTCAAACTTTGGTTCGAGCAGCGAGAGTGGTATTGGCACCTCAAAAGTGCCCAGTACTGAGTCTTCTGTTGAATTAGACAACCTATCCTCTATAACTGGAACTACCTTGTGCAAAGGTGTTCACGGAGTTCATGCAAATGGAAGTGGTGCAAGATTAAATGTCAATGTTGTTCCATATGGCCAACGCAGTCCAGAAGATTCTAAAAACCTTTTTTCTGAATTAAATCCTTTCCAGATAAAGGGAACTGGAAAGAACTCCGCTCATTCCAAAACTACAGCAAATAGAGTTCCAGAGAACAAGACAACAAATAATGTTATCTCTGGACGGCCACCAGTTCCATTGATGTGGAAGAACCGCTATGCTTTCAATGAAGTCCCCAAAAAGCAAGAATATGATTATATGGATGGCCTTTTTCCAAGAATGAACAGAGAATCCAATGATTATATTGATACTTCTACCAGTTCTACTTCTACTGTATCCGAAAAGATTGATCCTGACAGATACAAAAAGTCACAAGTGATAAATAATACCCAGAATCCATTTCAAGCTATGAGTTCAGTGTCTGAATCTGATGATATTGGATCGGATATAAATGAACATCTTAAGGATGATAATAACATGAAAGAGCTTGAGAACAACGAAGTTGACTATCATCACCGAAGAAAGTGCACTCATGATAGATTTGTGGGCAGCAATTTGAATCTAAAGGATCCTCAAAGTCCTAGCTCACTCTTTAATTCTGTCACAAATAGGGTTGATCAGGTACTGGATGATGTTGATGTTGGCGATTGTGAAATTCCATGGGAAGACTTGGTCATTGGTGAAAGAATTGGCCTAGGTTCTTATGGTGAGGTCTACCGTGCTGATTGGAATGGCACTGAGGTTGCTGTGAAAAAGTTCTTGGATCAGGATTTTTCAGGTGCTGCCTTGGCAGAGTTCAAAAGAGAAGTACGGATAATGCGTAGATTGCGTCATCCAAATGTTGTTTTATTCATGGGTGCAGTGACCCGGCCACCAAATCTCTCTATCATTACAGAGTTTCTTCCTAGGGGAAGCTTATTTCGGATTCTACATCGTCCTCAATCTCAAATAGATGAGAAACGTAGAATCAAAATGGCACTGGATGTGGCAAGAGGCATGAATTGCCTGCATACCAGCACTCCTACAATTGTTCACCGGGATCTGAAATCCCCTAATCTGTTGGTTGATAATAACTGGAATGTGAAGGTATGTGATTTTGGCTTGTCACGCTTGAAACACAATACTTTCTTGTCATCCAAATCAACAGCAGGAACGCCTGAGTGGATGGCACCTGAGGTTCTCCGCAATGAGCCCTCTAATGAGAAGTGCGACGTTTATAGTTTTGGAGTTATTCTCTGGGAGCTTGCTACTTTAAGATTGCCATGGATTGGAATGAACCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAAAATCGACGCCTTGACATTCCGAAGGAAGTCGATCAAGTGGTTGCTAGAATAATTTGTGAATGTTGGCAAACTGATCCAAACTTGCGGCCGTCATTTGCGCAGCTGACTGTGGCTCTGAAACCTTTGCAACGTCTCGTCATCCCATCGAACCAGGATCAATTGGTTTCACCATTGCCGCAGGAGATTTCTGTAAGTTCTACACCTTGA 2787 0.4241 MKNIFKKLHKGISVQNSSFTPASPSSSSPSPVTVQGGGALNTTSLNAAKLQDYFTSEEEFQYQLALAISASNSEFRDDSENDQIRTATLLSLGGHRIESVRDKSEAAEALSRQYWEYNVLDYEEKVVDGFYDVYRLSTEPAWQGKMPSLSELEANQGRSSFEVVIVNLAVDPALEELLQVAHCIALDCPVAEVSVLVQRLAELVTGHMGGPVKDANIMLASWMERSTELRTSLHTSVFPIGSINIGLSRHRALLFKVIADHIKLPCRLVKGSHYTGVEDDAINIVKLKDEREFLVDLMAAPGTLIPADILSMKETVLNPYNPRVMKTPSFPPSNDPRFSYSRPIPSHGEGCSTNPVVASNLPLDRRFCYENSDSLISNFGSSSESGIGTSKVPSTESSVELDNLSSITGTTLCKGVHGVHANGSGARLNVNVVPYGQRSPEDSKNLFSELNPFQIKGTGKNSAHSKTTANRVPENKTTNNVISGRPPVPLMWKNRYAFNEVPKKQEYDYMDGLFPRMNRESNDYIDTSTSSTSTVSEKIDPDRYKKSQVINNTQNPFQAMSSVSESDDIGSDINEHLKDDNNMKELENNEVDYHHRRKCTHDRFVGSNLNLKDPQSPSSLFNSVTNRVDQVLDDVDVGDCEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLFRILHRPQSQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWIGMNPMQVVGAVGFQNRRLDIPKEVDQVVARIICECWQTDPNLRPSFAQLTVALKPLQRLVIPSNQDQLVSPLPQEISVSSTP* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00078 928 PRINTS Tyrosine kinase catalytic domain signature 826 848 IPR001245 GO:0004672|GO:0006468
Pte13g00078 928 PRINTS Tyrosine kinase catalytic domain signature 807 817 IPR001245 GO:0004672|GO:0006468
Pte13g00078 928 PRINTS Tyrosine kinase catalytic domain signature 721 734 IPR001245 GO:0004672|GO:0006468
Pte13g00078 928 PRINTS Tyrosine kinase catalytic domain signature 760 778 IPR001245 GO:0004672|GO:0006468
Pte13g00078 928 PRINTS Tyrosine kinase catalytic domain signature 870 892 IPR001245 GO:0004672|GO:0006468
Pte13g00078 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Pte13g00078 928 Gene3D Transferase(Phosphotransferase) domain 1 726 909 - -
Pte13g00078 928 SUPERFAMILY Protein kinase-like (PK-like) 630 895 IPR011009 -
Pte13g00078 928 FunFam Serine/threonine-protein kinase isoform 1 638 725 - -
Pte13g00078 928 Gene3D Phosphorylase Kinase; domain 1 640 724 - -
Pte13g00078 928 SMART serkin_6 647 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00078 928 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Pte13g00078 928 MobiDBLite consensus disorder prediction 455 483 - -
Pte13g00078 928 Pfam Ethylene-responsive protein kinase Le-CTR1 107 305 - -
Pte13g00078 928 Pfam Protein tyrosine and serine/threonine kinase 648 897 IPR001245 GO:0004672|GO:0006468
Pte13g00078 928 ProSiteProfiles Protein kinase domain profile. 647 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00078 928 FunFam PAS domain-containing protein tyrosine kinase family protein 725 914 - -
Pte13g00078 928 CDD STKc_MAP3K-like 653 896 - -
Pte13g00078 928 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 181 903 - -
Pte13g00078 928 MobiDBLite consensus disorder prediction 16 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00078 Pte-Chr13 692632 700752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00078 1 884 MAP Kinase Kinase Kinase AT1G08720 57.684 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pte13g00078 PK_Tyr_Ser-Thr 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00078 - - aprc:113870732 1251.88