Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00070 ATGGAGCAGTACGATATATTGGAACAAATTGGGAAGGGAGCCTTTGGTTCTGCTCTGCTTGTCAAGCATAAGCACGAAAAGAAGAAGTGCGAACGGAATCAGATGGCCATTTTCTCTTCTATGCCTCTACTGATACTACTGACTATGCTATACACTTTCAATTATCCACTGACCGTTGTAATTTACTTCTTTGATATGTTAAGGTATGTGTTGAAAAAAATTCGTCTCGCCCGCCAAACAGAGAGGTCTCGTAGATCTGCTCACCTGGAGATGGAGCTCATTTCTAAGTTACGAAATCCATTTATTGTGGAGTACAAAGATTCCTGGGTAGAAAAGGGTTGCTATGTGTGCATTGTTATTGGTTTTTGTGAAGGGGGAGATATGGCTGAGGCTATTAAAAAGGCTAATGGTGTTCTTTTCCCAGAAGAGAAACTCTGTAAATGGCTTGTTCAACTTCTTATGGCTCTTGATTACTTGCACATGAATCATATTCTTCACCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAAACATCCGTCTTGGTGACTTCGGACTTGCAAAAATGTTGACTTCAGACGATCTTGCTTCCTCAGTTGTTGGAACTCCCAGCTATATGTGTCCTGAGCTTCTTGCTGATATACCATACGGTTCAAAATCAGACATTTGGTCCTTAGGATGCTGTATATATGAAATGACAGCCCTTAAACCTGCATTTAAAGCATTTGATATACAAGCCCTGATTAACAAAATAAACAAGTCCATAGTTGCCCCACTGCCTACAAAGTATTCAGGTGCATTTCGAAGTCTTGTCAAAAGCATGCTGCGGAAAAACCCAGAACTGAGGCCTAGTGCTGCAGAGCTTCTTGGGCATCCACACCTTCAACCTTATGTTATTAGGGTCCATCTTAAAATCAACAGCCCCAGACGCAGTAGCCTACCAGTTCACTGGTCAGAATCCAACTATATGAGGAAAACTAGATTTTTAGATCCAGACGAAGATACTGTTTATGCTGATGTGGATAAACAGCATATTTTCAGCAGTGGTCGGACTTTAACTCCTATTTTATCTGGTGCTGAGCGAGATTCCATATCCTTCATACAGGAGATACATTCCACTTCAATAATAGCAGAATTATCAATTGCAACTACCCGTAAAGAGGCATGCGTAGAGAAAAAGGTTGCCTCAAGGACTTCAAGTGTTACCAAAGCTCCATCTAAAGCTTCTGCTGTCGCTAAGAAATCAGCTGAGCACTTGAAGAACCAACCTGTTTTTTTTTCTCGCAATGTGAGAAAATCCGATACTGCGGCACGGAGATCTTCTTTACCATTGCCATCTGTCGTTCAACAATCCTGTCCCAGATCTGGAAACAACACTGGTGTGCTTTGCGATATTAAATCTCCAGATGTTTCAGTAAATTCACCCCGAATTGACAGAATTGCCGAATTCCCTTTGGCATCATATGAAGAACCATTCTTTCCCCGTCGTAGAACATCATCGGTTTCTGTTCAAGGTTCCTCTGGCACCCCACCTTGTGGCGATCGGTCAATCACAAAAGATAAATGCACAGTTCAGGTATGCGAGAAAGCCCCTGAGAAGACCACTTATGTGGATCCATGGCAGGAAATCAAGCGTTGCATGGTTCAGAATGTCGAGGAAAGGAGTGACTCCTCTGATCAAAATGCAACTGCTGGAGCATCCAGTCGCACCTCATCAGACTTGCGCAGACGGCGTTTTGACCCCTCTTCGTTCCAACAAAGGGCCGAAGCTTTGGAAGGAGTGCTTGAATTTAGTGCAAGATTGCTGCAACAGGAAAGGTATGAAGAGCTTGGGGTTCTGCTGAAACCTTTTGGGCCTGGGAAGGTTTCCCCTAGAGAAACTGCCATATGGTTGACTAAGAGTTTCAAAGAGAACACCGGCAAGCAGGAAGATTGA 1944 0.43 MEQYDILEQIGKGAFGSALLVKHKHEKKKCERNQMAIFSSMPLLILLTMLYTFNYPLTVVIYFFDMLRYVLKKIRLARQTERSRRSAHLEMELISKLRNPFIVEYKDSWVEKGCYVCIVIGFCEGGDMAEAIKKANGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQNIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTALKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRSLVKSMLRKNPELRPSAAELLGHPHLQPYVIRVHLKINSPRRSSLPVHWSESNYMRKTRFLDPDEDTVYADVDKQHIFSSGRTLTPILSGAERDSISFIQEIHSTSIIAELSIATTRKEACVEKKVASRTSSVTKAPSKASAVAKKSAEHLKNQPVFFSRNVRKSDTAARRSSLPLPSVVQQSCPRSGNNTGVLCDIKSPDVSVNSPRIDRIAEFPLASYEEPFFPRRRTSSVSVQGSSGTPPCGDRSITKDKCTVQVCEKAPEKTTYVDPWQEIKRCMVQNVEERSDSSDQNATAGASSRTSSDLRRRRFDPSSFQQRAEALEGVLEFSARLLQQERYEELGVLLKPFGPGKVSPRETAIWLTKSFKENTGKQED* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00070 647 SUPERFAMILY Protein kinase-like (PK-like) 1 337 IPR011009 -
Pte13g00070 647 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 599 - -
Pte13g00070 647 ProSiteProfiles Protein kinase domain profile. 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00070 647 Gene3D Transferase(Phosphotransferase) domain 1 123 310 - -
Pte13g00070 647 Pfam Protein kinase domain 69 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00070 647 CDD STKc_Nek 3 297 - -
Pte13g00070 647 FunFam Serine/threonine-protein kinase Nek2 123 313 - -
Pte13g00070 647 MobiDBLite consensus disorder prediction 555 583 - -
Pte13g00070 647 MobiDBLite consensus disorder prediction 556 573 - -
Pte13g00070 647 Gene3D Phosphorylase Kinase; domain 1 63 122 - -
Pte13g00070 647 Gene3D Phosphorylase Kinase; domain 1 1 40 - -
Pte13g00070 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Pte13g00070 647 SMART serkin_6 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00070 Pte-Chr13 624863 630546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00070 70 298 MAP Kinase Kinase Kinase AT1G53570 31.624 7.81e-32 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pte13g00070 Pkinase 3.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00070 K08857 - qsa:O6P43_011197 874.774