Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00069 ATGGAGAAAGCCAGCAAATGGATAAGAAACTTTCTTCTAGGGAGAAAGCGAGAGAAAAAGAAGAATGATGTTCCAGCTATTGAATATGGAATTACCAACATAGGTACTCTTCCGGGAAATGCTAGAGTTAAACGAAGGTGGAGTTTTGCAAAAATTGCACGCAAAGTAGCATCCCCTAAGCTTTCCAACTCTCTTGATTCCATTGATTCCTCTTTGCTACCAAGGGACATGTTACTAACTCTCTCCAGAGGCATTAATCTAAAAGAGGCATTATCCATAGTCCCAGGACTCCCAAGATACAGAGAGAATGCTGCGGCTACAAAAATTCAGGCTGCCTACCGATCCTATTTGGCAAGGAGAGCTCTACATGCTTTAAGGGGACTGGTCAAGCTCCAGGCACTTGTAAGGGGTTACCTTGTCAGGAAAAGAAGCACTGCAGCCCTGCAAAGTATGCATGCTTTAATGTCCATACAACTTCGAGCTCGAATTCAGCGAATCCAATTGGCAGAAAATGAACATGTCCGAAAGCAACAATCGCTACAAAGGAATGTTCATGCAGGTTGCTGGAAGAAAATTGCGTACGAGGAGGCAGTGGATACGAGTGTCCAAGAAATGGGGGGAGTGTATAAAAGCAGAAGTGGCCATCTGAATCATTCATATGTTGAAAAGACAGAGCGCGGTGTTGCAACTTTCTACTCAGGAGAACTTTTTGCTCCAAAACGAGGATATCAAGACAAGGAATCTGTCTCAAACACATACGCAGTACCAAAAGCTCGACATGACCGTGCATCCATGTCTCAGTCAAACAAAGCCTCCTCCAGATTACAACAATACCCTGATTATCTAAACCTGGTATCTGGGGACCATTTTGTCCCGCCAAGTTACATGATCAACACAGAATCGTCTAGGGCGAAAGTGAGATCACAGAGTGAACCGAAACAAAGACCCAACTCGGACACGAGGCATAATAATAAAGTTAAGAATACAGCCTCAGTGCAGAAAATGAGTCGCCGCCTATCCAATGATCAAAGGCAACCTCATGCTTCAGATTCCAAACGCTACAATCGTGACCTATTAGATCCGCGTATGCTCAGTAGCATGACTGGTTCTTATCGTTCATCACAAGCTCTATTTTGGAAACCTAATACAACCCAGATATTCCAGATTGAACCATTGTAA 1179 0.4368 MEKASKWIRNFLLGRKREKKKNDVPAIEYGITNIGTLPGNARVKRRWSFAKIARKVASPKLSNSLDSIDSSLLPRDMLLTLSRGINLKEALSIVPGLPRYRENAAATKIQAAYRSYLARRALHALRGLVKLQALVRGYLVRKRSTAALQSMHALMSIQLRARIQRIQLAENEHVRKQQSLQRNVHAGCWKKIAYEEAVDTSVQEMGGVYKSRSGHLNHSYVEKTERGVATFYSGELFAPKRGYQDKESVSNTYAVPKARHDRASMSQSNKASSRLQQYPDYLNLVSGDHFVPPSYMINTESSRAKVRSQSEPKQRPNSDTRHNNKVKNTASVQKMSRRLSNDQRQPHASDSKRYNRDLLDPRMLSSMTGSYRSSQALFWKPNTTQIFQIEPL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00069 392 Gene3D - 99 154 - -
Pte13g00069 392 Pfam IQ calmodulin-binding motif 104 122 IPR000048 GO:0005515
Pte13g00069 392 Pfam IQ calmodulin-binding motif 129 143 IPR000048 GO:0005515
Pte13g00069 392 MobiDBLite consensus disorder prediction 300 360 - -
Pte13g00069 392 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Pte13g00069 392 MobiDBLite consensus disorder prediction 245 272 - -
Pte13g00069 392 MobiDBLite consensus disorder prediction 323 339 - -
Pte13g00069 392 MobiDBLite consensus disorder prediction 340 359 - -
Pte13g00069 392 PANTHER IQ-DOMAIN 5-RELATED 1 342 - -
Pte13g00069 392 SMART iq_5 101 123 IPR000048 GO:0005515
Pte13g00069 392 SMART iq_5 124 145 IPR000048 GO:0005515
Pte13g00069 392 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Pte13g00069 392 Pfam Protein of unknown function (DUF4005) 273 339 IPR025064 -
Pte13g00069 392 MobiDBLite consensus disorder prediction 306 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00069 Pte-Chr13 623174 624793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00069 1 316 IQD Protein Family AT4G14750 33.022 1.11e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00069 - - qsa:O6P43_007620 276.174