LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g00061	ATGGATAGGGTGTTTTCGATTGGTGAACTCTCTGACCAGTTCTGGTCACCCACATTACCAGCTGATTTAGTGGGTGGATTATCCAAATTGAATCGAAGCGCATCTGAATGGGCTTTTGAGCGCTTCTTACAGGAGCAGGCTGCTTCCGTTCGTACTCACAATCAGACCACCCACGTATCTCCGCCTATTTCTGCACCTGCACCGTGTTCTTCTTCGTCAGCTGCTGGAAAAAAGGATGACGTTGTTGTTGAGATCGACGACAATGACACTCTGTCACCACCACCCAAGGCCAAACAGGACCAAGGGCAGACTCAGATGAGCAACCTGCCTACGTTGACTCCTGTCCACGTCGCGTTCTGTGACAATGAGCATCCTCCTGATATTCCGAAGGATTCTCAGGCTTATCAGGATTTTCTCAAGAGCAAACTCAATCTCGCTTGCGCAGCAGTAGCTATGACCAGGGGACCTTTCATTAAATCTCAAGAGTCAACTGCTTTTGCTGATAATGGATCGCAGGCTTCTAGTTCTTCTCAAATGGGTTCTCAAGCTACTTTTAAAGGATCTGGGTGCGATCCTTTGAGATCATTAGACAAAGACATCAAAGGACCGTTTGGTATTCTTTCGTTACCTGCAATAATGCATAAGAAATCTGGAACTGCAGCAAGGACAAGCAGCGGATCATCAAGAGAATTGTCAGATGATGATGAAGCTGAGGGGGAGACTGAACTTGCAGAGAATATGGACCCTGCTGACGTTAAACGTGTAAGGAGGATGCTTTCAAATAGGGAATCAGCTAGACGCTCGAGAAGAAGGAAGCAAGAACATCTTACAGAGCTTGAGACGCAGGTTGCTCAATTAAGAGTTGAAAACTCATCCTTGTTGAAGCGAATGAGTGACGTAAGCCAAAAGTACAGCGAGGCAGCTGTTGACAACAGAGTTTTGAAGGCTGATGTTGAAACGTTGAGAGCAAAGGTCAAGATGGCCGAGGAGACTGTCAAAAGAATAACTGGCTTGAATCCCATGCTACATGCCATGTCAGAGATGTCAATGGGGATCACACCCTTTGATGGTAGCTCTTCTGATTCAGGTGATGCTGCTGTACCTGTACAGGATGACAAAAATGGTGGATTTTATCCAGACACTTCTAACAATCCTACATCAAGTCATAATATAAGTGTCGACAGTGGGTTGGCAAATATTCCTCCGCATGGGAACAAGATGGGTCGTACAGCATCCTTGCAGCGGGTGGCAAGCTTAGAACATCTGCAAAAGCGGATTCGTGGAGGTGCAAATGCAACTTGA	1302	0.4631	MDRVFSIGELSDQFWSPTLPADLVGGLSKLNRSASEWAFERFLQEQAASVRTHNQTTHVSPPISAPAPCSSSSAAGKKDDVVVEIDDNDTLSPPPKAKQDQGQTQMSNLPTLTPVHVAFCDNEHPPDIPKDSQAYQDFLKSKLNLACAAVAMTRGPFIKSQESTAFADNGSQASSSSQMGSQATFKGSGCDPLRSLDKDIKGPFGILSLPAIMHKKSGTAARTSSGSSRELSDDDEAEGETELAENMDPADVKRVRRMLSNRESARRSRRRKQEHLTELETQVAQLRVENSSLLKRMSDVSQKYSEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMLHAMSEMSMGITPFDGSSSDSGDAAVPVQDDKNGGFYPDTSNNPTSSHNISVDSGLANIPPHGNKMGRTASLQRVASLEHLQKRIRGGANAT*	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g00061	433	SUPERFAMILY	Leucine zipper domain	253	303	IPR046347	GO:0003700\|GO:0006355
	Pte13g00061	433	Pfam	Basic leucine-zipper C terminal	320	430	IPR020983	-
	Pte13g00061	433	SMART	brlzneu	249	313	IPR004827	GO:0003700\|GO:0006355
	Pte13g00061	433	Pfam	bZIP transcription factor	252	305	IPR004827	GO:0003700\|GO:0006355
	Pte13g00061	433	CDD	bZIP_plant_GBF1	254	305	IPR045314	GO:0003700\|GO:0006355
	Pte13g00061	433	Coils	Coil	311	331	-	-
	Pte13g00061	433	Coils	Coil	262	296	-	-
	Pte13g00061	433	Gene3D	-	252	308	-	-
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	376	395	-	-
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	50	71	-	-
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	168	191	-	-
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	373	409	-	-
	Pte13g00061	433	FunFam	BZIP transcription factor	251	302	-	-
	Pte13g00061	433	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	251	306	IPR004827	GO:0003700\|GO:0006355
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	217	251	-	-
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	50	78	-	-
	Pte13g00061	433	MobiDBLite	consensus disorder prediction	168	185	-	-
	Pte13g00061	433	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	256	271	IPR004827	GO:0003700\|GO:0006355
	Pte13g00061	433	PANTHER	BASIC LEUCINE ZIPPER 63	1	430	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g00061	Pte-Chr13	570193	573784	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g00061	1	431	bZIP Transcription Factor Family	AT4G02640	36.830	1.47e-46	164

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Pte13g00061		bZIP_C	1.3e-35	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g00061	K25784		-	qsa:O6P43_007630	440.269