Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00059 ATGGCTGGCAATTCTTCAGGAGGTTTAGGTGATGATTTCTTTGAGCAGATCTTAGCTATGCCGTCTACTTACTCAAGTACTGAGGTAACAGGGTATGGGAGGGCAGGAGCGGCTGACGTAGGTGCTATGCCAATGGTGTTGCAGTTAGGTTCTAGTGTTAGCACAGATGATGTGTCTGGTAGTGGTGGCAACAGTGGTGGGTTGAGAGGGATGGGGTCTATCGGGGTAGGTACCATGCCTCTTGGACTGAATTTAGAACATGGGTTTTTGAGACATGACCGAGACAGTGGTAGAAGCTTCAAGTTCAATGATGGCCTTACTGAAGCCAATAATAGTCGCCACTATCATCCTATTGCCCATAACAATACCACCGCCATCCCTTGTTCTAATTCTGCTGTAACTGGAGTTACCGAGAGAGAGTCAGTGCATATGACAAACTTGTTTCCTGCGTTTAATCAGCTGCATGCCCAGTCATTCAGGCCAACAGTGCCTCCATCACCCCATCCTCCTCAGCTCCAGCAGCCTTTTCAAGGTCAACCACCGCCTGCTGGGCCAGTTTCTACTGCACCACAACCACATGGCATTCGCCCCAGAGTCCGAGCAAGACGAGGACAAGCCACTGATCCCCATAGTATTGCTGAGAGATTACGTAGAGAAAGGATTGCAGAAAGAATGAAGGCGTTGCAGGAATTAGTTCCAAGTGCAAATAAGACTGACAGGGCAGCAATGCTTGATGAAGTTGTCGACTATGTGAAGTTTCTCAGGCTTCAAGTTAAGGTTTTGAGCATGAGTAGGCTGGGTGGAACAGGTGCAGTTGCTCAGCTCGTTGCCGATGTTCCTTTATCGACAATGGAGGGTGACAGAATGGAAGGCGGGACCAACCAACCATCATGGGAGAAATGGTCAAATGATGGCACAGAAGAACAAGTAGCAAAATTGATGGAAGAAGACATGGGAGCTGCCATGCAATTCCTTCAGTCCAAAGCACTTTGCATTATGCCAATATCTCTTGCCTCTGCAATTTTTCGCACCCCTCAGTCAGATATGCCGGCTGTCATCAAGACTGAATCAAATAACCATCCATAA 1086 0.4788 MAGNSSGGLGDDFFEQILAMPSTYSSTEVTGYGRAGAADVGAMPMVLQLGSSVSTDDVSGSGGNSGGLRGMGSIGVGTMPLGLNLEHGFLRHDRDSGRSFKFNDGLTEANNSRHYHPIAHNNTTAIPCSNSAVTGVTERESVHMTNLFPAFNQLHAQSFRPTVPPSPHPPQLQQPFQGQPPPAGPVSTAPQPHGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEVVDYVKFLRLQVKVLSMSRLGGTGAVAQLVADVPLSTMEGDRMEGGTNQPSWEKWSNDGTEEQVAKLMEEDMGAAMQFLQSKALCIMPISLASAIFRTPQSDMPAVIKTESNNHP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00059 361 Pfam Helix-loop-helix DNA-binding domain 210 254 IPR011598 GO:0046983
Pte13g00059 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 264 IPR036638 GO:0046983
Pte13g00059 361 MobiDBLite consensus disorder prediction 162 188 - -
Pte13g00059 361 FunFam Transcription factor bHLH66 202 267 - -
Pte13g00059 361 Gene3D - 200 262 IPR036638 GO:0046983
Pte13g00059 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 254 IPR011598 GO:0046983
Pte13g00059 361 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 85 339 - -
Pte13g00059 361 SMART finulus 211 260 IPR011598 GO:0046983
Pte13g00059 361 MobiDBLite consensus disorder prediction 158 213 - -
Pte13g00059 361 MobiDBLite consensus disorder prediction 285 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00059 Pte-Chr13 563615 567749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00059 174 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 73.797 1.56e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte13g00059 HLH 3.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00059 - - qsa:O6P43_007633 403.29