Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00036 ATGTGTGATACCCTTAAGAACCAGTATCAGCTTTGTGAAGAGATCGGGCGTGGTCGATTTGGTACCATCTACCGCTGCTTTCATCCGGCCTCAAACGAGTTCTATGCATGTAAAATCATCGACAAGCGCTGTCTGATCGATTCTACAGACCGTGAATGTCTTGAGAATGAAGCAAAACTCATGACCCTTGTGTCTCCTCACCCTAACATTGTTCAGATCTTTGATGTGTTCGAAAATGATGATTTCTTGTCTATAGTCATTGAACTTTGTAGACCTGTCACCTTGTTCGATCGTATTGTGAACTCCCCATTGCAGGAAACTGAAGCAGCTTCCTTGGTGAAGCAAATTCTTGAAGCTTTGGCGCAGTGTCACCGACATGGCATAGCCCATAGGGACATGAAGCCTGACAACCTTTTGTTTGGTTGGAGTGACCATCTTAAACTTGCCGACTTTGGATCGGCCGAGTGGTTCGGTGAGGACAGGCCTATGACTGGAATCGTGGGGACACCGTACTATGTGGCTCCTGAGATTTTGTCGGATGGAGAGTATAACGAGAAGGTGGATGTTTGGAGTTGTGGGGTGATCATGTATATAATGTTGTCGGGGATTCCACCCTTTTATGGAGACTCGGCAGCTGAGATTTTTCAGGCTGTTTTGAGGTGTAATCTTAGATTTCCTACAAGGGTTTTTAGGTTCGTCTCCCCTGCAGCTAAGGACTTGTTGAGGAAGATGATCTGTCGAGATGTTTCCAGGCGATTGTCAGCAGAGCAGGCCTTGAGGCATCCTTGGATCGTAGGTGGTGGAGAGACAGCTGATCTGACTTAA 825 0.4667 MCDTLKNQYQLCEEIGRGRFGTIYRCFHPASNEFYACKIIDKRCLIDSTDRECLENEAKLMTLVSPHPNIVQIFDVFENDDFLSIVIELCRPVTLFDRIVNSPLQETEAASLVKQILEALAQCHRHGIAHRDMKPDNLLFGWSDHLKLADFGSAEWFGEDRPMTGIVGTPYYVAPEILSDGEYNEKVDVWSCGVIMYIMLSGIPPFYGDSAAEIFQAVLRCNLRFPTRVFRFVSPAAKDLLRKMICRDVSRRLSAEQALRHPWIVGGGETADLT* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00036 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pte13g00036 274 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 274 - -
Pte13g00036 274 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00036 274 CDD STKc_CAMK 8 263 - -
Pte13g00036 274 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00036 274 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Pte13g00036 274 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte13g00036 274 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00036 274 SUPERFAMILY Protein kinase-like (PK-like) 4 266 IPR011009 -
Pte13g00036 274 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Pte13g00036 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 268 - -
Pte13g00036 274 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00036 Pte-Chr13 395174 397127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00036 9 272 EF-hand Containing Proteins AT1G50700 39.925 5.05e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte13g00036 Pkinase 7.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00036 - K08794 qsa:O6P43_007686 466.848