Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00035 ATGGCTGCAAGAATGTATGTGGGTCACGCCGGAGTTGAAAGCCCACCCAACCCATCCCGCAGAAAGAGGCTGGAGCCTGACTTCTCACACACCAACGTCAGCTCCGAAAAATCTGCAAGTAGCAGTGGTGGCTTTCGCGGTGGTGACGAGGAACATGATAAAGACTATTCAGTGGACGATCCCAAAGAAAACGCAACGGATGCTAGAACTAACGCTCGTCGCCCTAGAGGTCGACCACCTGGCTCCAAGAACAAACAGAAGCCACCCGTGGTTGTCACCAAAGACAGCGTAAACGCTCTCAAGAGCCATATTTTGGAGGTGACTGATGGAGCCGACATTGTAGAGAGTTTAGACCAGTATGCGAGAAAGCGACAGAGAGGGTTCTGTGTGCTCAGTGGCACGGGGGTCGTAAGTAATTTGACACTTGCACAGCCGTCGTCGCCTGGTGCAGCCATAGCGCTACCCGGAAGGTTCGAGATACTCTCTTTGAACGGTGCGTTTCTTCCAGAACCGGCACCGAAAGGGGCCAGTGGTCTGACTGTGTACTTAGCCGGAGATCATGGCCAGGTGGTGGGTGGAAGGGTAGTGGGTCCTTTGTTGGCTCGTGGTTCAGTTCTCATAATAGCTGCTGCTTTCTCCAATGCAATGTACGACATGTTGCCTATAGAGGATGAAGAGGAAGCCTTGGAGCAAGTAAACGAAGGAGGCAGCGGTTATGAGTCTGGTCCACAGATGGGCGTTAATGGTGGGCAGCAACGGTGCGATTCAATGGTAAGCAATGCGGAGCTGGAAGTTGCTGCCGGAATTTCCTCTCGTTTTGAGTGA 825 0.5273 MAARMYVGHAGVESPPNPSRRKRLEPDFSHTNVSSEKSASSSGGFRGGDEEHDKDYSVDDPKENATDARTNARRPRGRPPGSKNKQKPPVVVTKDSVNALKSHILEVTDGADIVESLDQYARKRQRGFCVLSGTGVVSNLTLAQPSSPGAAIALPGRFEILSLNGAFLPEPAPKGASGLTVYLAGDHGQVVGGRVVGPLLARGSVLIIAAAFSNAMYDMLPIEDEEEALEQVNEGGSGYESGPQMGVNGGQQRCDSMVSNAELEVAAGISSRFE* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00035 274 Gene3D - 101 231 - -
Pte13g00035 274 MobiDBLite consensus disorder prediction 232 253 - -
Pte13g00035 274 ProSiteProfiles PPC domain profile profile. 97 235 IPR005175 -
Pte13g00035 274 MobiDBLite consensus disorder prediction 46 74 - -
Pte13g00035 274 MobiDBLite consensus disorder prediction 1 91 - -
Pte13g00035 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 213 IPR005175 -
Pte13g00035 274 MobiDBLite consensus disorder prediction 16 30 - -
Pte13g00035 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 229 - -
Pte13g00035 274 CDD DUF296 101 185 IPR005175 -
Pte13g00035 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 249 IPR014476 GO:0003680
Pte13g00035 274 FunFam AT-hook motif nuclear-localized protein 100 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00035 Pte-Chr13 364645 366207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00035 61 248 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 58.947 2.26e-64 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00035 - - zju:107412190 266.544