Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00032 ATGGTTGGGCAATGCATGCATGATGAGAAATCAGCTGCCTTTACTGTTCTTATTGTGGATGATGACAATGTCTGCTGCACCGTCCACAAGGCTACTGTTCAAAAGAAGCTTGGAATAGTCCCCACCGTTGTTAGGAACGGAAGAGAAGCACTCAACCTGTATCACTCCGGGCAATTTTTCAATATCATTTTTATGAACATGGAGATGCCAGTGATGAATGGAGTTGAGGCAACAAAAGAGCTGCGGGCAATGGGGGTTAAGAGCATGATTGTGGGAGTCACTTCTTACGGTGAAGGCAAACAGAGAGATGAGTTTATGGCTGCTGGACTTGACAAATGCCTGGAGAAGCCATTGACTATGGCTATGGTGGGAGCTATCATGGTGGAATATGACAAGAAATTCAATGAAACCTGCATCTACTGTGGCGTTCCTTACAAAAACTCTACTTGA 450 0.4467 MVGQCMHDEKSAAFTVLIVDDDNVCCTVHKATVQKKLGIVPTVVRNGREALNLYHSGQFFNIIFMNMEMPVMNGVEATKELRAMGVKSMIVGVTSYGEGKQRDEFMAAGLDKCLEKPLTMAMVGAIMVEYDKKFNETCIYCGVPYKNST* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00032 149 Gene3D - 3 134 - -
Pte13g00032 149 SUPERFAMILY CheY-like 14 130 IPR011006 -
Pte13g00032 149 SMART REC_2 14 126 IPR001789 GO:0000160
Pte13g00032 149 ProSiteProfiles Response regulatory domain profile. 15 131 IPR001789 GO:0000160
Pte13g00032 149 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 127 - -
Pte13g00032 149 Pfam Response regulator receiver domain 16 120 IPR001789 GO:0000160
Pte13g00032 149 CDD REC_hyHK_CKI1_RcsC-like 16 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00032 Pte-Chr13 334769 335356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00032 10 123 Response Regulator Gene Family AT3G04280 45.690 2.68e-26 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte13g00032 Response_reg 9.6e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00032 - - gmx:102665311 125.561