Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00023 ATGTTCAAATTCTTGAAGGAAGTGGTTGGCGGATCTAGTACCGGTCTCAAGGATCTACCATACAACGTCGGCGAACCTTATCCGTGTGCTTGGGGATCTTGGGCTCATCACCGAGGAACCTCCAAGGATGATGGATCTGCTGTGTCAGTTTTTACCCTTTCCGGTAGTAATGCTCAAGATGGACATTTAGCTGCTGGTCGCAATGGTGTGAAGCGTCTTCGAACTGTCAGGCATCCAAACATTTTATCATTTCTTCACAGTACTGAGACTGAAACTTTTGATGGTAGCTCTACCAAGGTTACTATATACATTGTAACAGAACCTGTCATGCCACTCTCTGAGAAAATTATAGAGTTGGGACTGGAAGGTGCGCAAAGGGATGAATATTTTGCATGGGGCCTGCATCAGATAACCAAAGCTGTGAGCTTTTTGAATAATGACTGTAAACTTGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTTGTCACTCAAACATTGGATTGGAAGTTGCATGCTTTTGATGTGCTATCCGAGTTTGATGCAAATAATGGAACTTCTACTATGCCAATGCTGCAATATGCTTGGCTTATTGGTTCCCAATACAAACCAATGGAATTATCAAAATCTGACTGGGATGCTGTTAGAAACTCTCCTCCATGGGCAATCGATTCTTGGGGATTAGGGTGTCTTATCTATGAGCTGTTCTCTGGAATGAAGCTGATGAAAACAGAAGAATTGCGTAATACTGCTGCCATTCCGAAGTCTCTGCTTCCAGACTATCAGCGGCTCCTGAGTTCCATGCCTTCTCGTAGGCTTAACACGTCAAAACTTATAGAGAATAGTGAATATTTCCAAAATAAGCTGGTAGACACTATTCATTTTATGGAAATTCTTACATTGAAAGATAGTGTTGAGAAAGATTCTTTCTTCCGAAAGCTTCCGGCTTTGACTGAACAGCTTCCGCGTCAGATTGTGCTAAAAAAGTTACTTCCTTTACTAGCTTCGGCCCTTGAATTTGGTTCGGCTGCTGCCCCTGCTTTGACTGCATTTCTGAAAATGGGTTCTTGGCTTTCTCCTACGGAATTCAGTGCCAAGGTACTGCCTACTATAGTGAAACTCTTTGCTTCCAATGACCGAGCAGTTCGTGTTGCGCTCCTTCAACACATAGATCAATTCGGAGAGTCATTGTCTGCTCAAATGGTTGATGAGCAAGTTTATCCACATGTTGCCACCGGGTTCTCTGATACATCTGCTTTTTTACGGGAACTGACTCTCAAGTCCATGCTTGTCCTGGCTCCGAAGCTCGCTCAAAGGACCATCTCAGGATCATTATTGAAGCACTTATCAAAGTTACAGGTTGATGAAGAACCAGCAATTAGAACCAACACAACTATCTTACTTGGGAATATAGCTAGCCACTTGAATGAAGGAACAAGAAAAAGGGTACTGATCAATGCATTTACCGTCCGTGCACTTCGTGACACTTTCGGCCCTGCCAGAGGAGCAGGGATTATGGCTTTATGTGCAACCAGTTCATACTACGATTTTACTGAAGTTGCAGCCCGAATTCTTCCAAATATTGTTGTTCTCACGATAGATCCTGATAGTGATGTTCGATCTAAGGCTTTTCAAGCCGTCGATCAATTTTTGCAGCTGGTCAAGCAACATTATGAAAAGGCAAATACAGACACAAATGGGACTGCAAGCATGGGGATCCCATACGTTCCTGGAAATGCTAGTTTACTTGGATGGGCTATGAGTTCCCTGACCTTGAAGGGTAAAACTTCTGATCACGTTCAAGTTGCTACTGCAACTGCCAGTTCAACTCTCACTTCTTCATCTTTGAGTGCTAGCTATGAAGTTCCGGACACTCCATCTACAGCACCTGTCCATGTAGATTCTACCCTGGCTTTTACTGAGCACCCTGCACCCGTTTTACCCACATCTATGGATGGATGGGGAGAACTCGAGAATGAATTACAGGAAGAGCATGAAAATGACAAGGATGGATGGGATGATCTTGAACCGCTTGAAGAGCCAAAGCCATTCCCAGCTCTTGCAAACATCCAAGCTGCTCAAAAACGGCCTGTATCACAATCTGCCAAGCAAATTAAACAAGGTCAGTTATTTGAGCTTTTTGACCAGATGAAAATCTACTCTGTTCTAGATGTGTGA 2175 0.4345 MFKFLKEVVGGSSTGLKDLPYNVGEPYPCAWGSWAHHRGTSKDDGSAVSVFTLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTETETFDGSSTKVTIYIVTEPVMPLSEKIIELGLEGAQRDEYFAWGLHQITKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDANNGTSTMPMLQYAWLIGSQYKPMELSKSDWDAVRNSPPWAIDSWGLGCLIYELFSGMKLMKTEELRNTAAIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILTLKDSVEKDSFFRKLPALTEQLPRQIVLKKLLPLLASALEFGSAAAPALTAFLKMGSWLSPTEFSAKVLPTIVKLFASNDRAVRVALLQHIDQFGESLSAQMVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLAQRTISGSLLKHLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFGPARGAGIMALCATSSYYDFTEVAARILPNIVVLTIDPDSDVRSKAFQAVDQFLQLVKQHYEKANTDTNGTASMGIPYVPGNASLLGWAMSSLTLKGKTSDHVQVATATASSTLTSSSLSASYEVPDTPSTAPVHVDSTLAFTEHPAPVLPTSMDGWGELENELQEEHENDKDGWDDLEPLEEPKPFPALANIQAAQKRPVSQSAKQIKQGQLFELFDQMKIYSVLDV* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00023 724 Gene3D Transferase(Phosphotransferase) domain 1 112 279 - -
Pte13g00023 724 ProSiteProfiles HEAT repeat profile. 523 561 IPR021133 -
Pte13g00023 724 MobiDBLite consensus disorder prediction 660 680 - -
Pte13g00023 724 SUPERFAMILY ARM repeat 293 556 IPR016024 -
Pte13g00023 724 Gene3D - 282 562 IPR011989 -
Pte13g00023 724 MobiDBLite consensus disorder prediction 660 679 - -
Pte13g00023 724 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Pte13g00023 724 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00023 724 SMART serkin_6 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00023 724 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 9 684 - -
Pte13g00023 724 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Pte13g00023 724 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00023 Pte-Chr13 253136 265915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00023 70 291 MAP Kinase Kinase Kinase AT5G66850 23.932 4.36e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Pte13g00023 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00023 K08876 - qsu:112026948 1147.11