Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00017 ATGGCGTTAATATTGGAACCACAACCCAATGGCGACGATGTTTTGGTCCCTCCACCCAATTTCTCAATGGTAGAAGATGCCATTTTCCGATCCGGCTTCCCTAACCCTTCCAATTTCTCCTTCCTCGATTCCCTCCGACTTCGCTCCATCATATGTGCGAAATCATCCGGTGTTGATCCATTGCAAGCGTGGGAAGGTAAACTCTGGCTTCATACCCAACGAATCTATGCTTAA 234 0.4744 MALILEPQPNGDDVLVPPPNFSMVEDAIFRSGFPNPSNFSFLDSLRLRSIICAKSSGVDPLQAWEGKLWLHTQRIYA* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00017 77 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 55 - -
Pte13g00017 77 Pfam Tyrosine phosphatase family 15 53 IPR004861 -
Pte13g00017 77 Gene3D Protein tyrosine phosphatase superfamily 14 75 IPR029021 -
Pte13g00017 77 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 55 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00017 Pte-Chr13 175894 177102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00017 1 51 Protein tyrosine phosphatase (PTP) family AT3G02800 66.667 3.20e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00017 K18045 - cave:132171884 76.6405