Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01269 ATGGCTATCACCACTGCCACCTCCTGCTTACTGCTACTACTCTCCTTGAGTTCTACTTTATTGGTTCCCCCTGCCACAGCAACCAATAGAGGAACCCATCAGAGCAATCGAAATTCCGACTTTGGAGGAGCTTACTATGATAAACAGAAGGAAGAAAGAGAGGCCGACAGAGTCACCAACTTGCCCGGACAACCACCTGTAAATTTCAACCACTACGCCGGTTATATCAATCTCAGACCAAACCAAGGGAAGGCATTGTTTTACTGGTTCTTTGAAGCACAGGAAGCTGCTCACCAAAAACCACTTGTTCTTTGGCTTAATGGAGGCCCGGGTTGCTCATCTGTAGGGTATGGTGCTGCACAAGAACTCGGTCCATTTCTAGTTCAAAATAAGGACCAAGTTACTTATAACAAATTCTCTTGGAATAAAGTTGCAAATATGCTGTTTGTGGAGGCACCAGTTGGGGTAGGGTATTCATACACCAACAATTCAGAGGATCTGCATAAGCTTGGTGATGAAGTCACTGCAATTGATACGCATGCTTTCTTACTTGGATGGTTCAAAAGGTTCCCAAACTTCAAATTGCATGACTTCTACATTGCCGGGGAGAGCTATGCTGGGCACTACGTCCCTCAGCTTGCGGAGGTCATTTTTGAAAGGAACAAAGGCGGCAGCAGAAGCAGAGGTTCTTACATAAATCTAAAGGGCTTCATGATTGGTAATGCAGTGATAAATGAACCATCGGACACATATGGAATGATTGACTATGCATGGAGCCATGCAATCATCTCTGACAAAGTCTACCATGGCATAACCAGAGAATGCAATTTTATGGTGGAAAAGCAGAACAGTGATTGTGAAAAGTATGCCAGAGGCTTTGCACTCGCTTACTCTGAAATTGACATTTACAGCATCTACTCTCCAGCTTGCCTCAATGCAACCTCTCCCAAAAAACTTGTAAGAGAGGGCATCCTGCTGCAAGATCTACCATCAGGCTATGATCCTTGCAGGGGGGACCATGTTAGGCAATACTTCAACAGACCCGATGTTCAGAAAGCCCTCCATGCAAACACCACAAAATTATCTTATCCATACACCCTTTGCAGCGCCGAAATTAGCAAATGGAATGACTCTGCAAACACAGTTCTTCCTGTCATAAGAAAGCTCTTAAACGCTGGTTTAAGGATCTGGATATACAGTGGGGACACTGATGGAAGAGTTCCAGTAACATCGACAAGATACAGTATAAACAAAATGGGGTTGAAAGTTGAACAAGAGTGGAGGTCATGGCTTCACAAGAAGCAAGTGGGTGGTTGGGTGGAGGTGTATGAGGGTGGTCTCACATTTGCAACAGTGAGGGGTGCTGGTCATCAGGTTCCAATGTATGCTCCTCAGCAGTCGCTTTCTCTCTTCACACATTTCCTCTCCGCTACGTTACTCCCATCATCCTCTCGCTCTACCTAA 1464 0.4515 MAITTATSCLLLLLSLSSTLLVPPATATNRGTHQSNRNSDFGGAYYDKQKEEREADRVTNLPGQPPVNFNHYAGYINLRPNQGKALFYWFFEAQEAAHQKPLVLWLNGGPGCSSVGYGAAQELGPFLVQNKDQVTYNKFSWNKVANMLFVEAPVGVGYSYTNNSEDLHKLGDEVTAIDTHAFLLGWFKRFPNFKLHDFYIAGESYAGHYVPQLAEVIFERNKGGSRSRGSYINLKGFMIGNAVINEPSDTYGMIDYAWSHAIISDKVYHGITRECNFMVEKQNSDCEKYARGFALAYSEIDIYSIYSPACLNATSPKKLVREGILLQDLPSGYDPCRGDHVRQYFNRPDVQKALHANTTKLSYPYTLCSAEISKWNDSANTVLPVIRKLLNAGLRIWIYSGDTDGRVPVTSTRYSINKMGLKVEQEWRSWLHKKQVGGWVEVYEGGLTFATVRGAGHQVPMYAPQQSLSLFTHFLSATLLPSSSRST* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01269 487 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Pte12g01269 487 Gene3D - 382 476 - -
Pte12g01269 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Pte12g01269 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 211 IPR001563 GO:0004185|GO:0006508
Pte12g01269 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Pte12g01269 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Pte12g01269 487 Pfam Serine carboxypeptidase 62 476 IPR001563 GO:0004185|GO:0006508
Pte12g01269 487 Gene3D alpha/beta hydrolase 52 312 IPR029058 -
Pte12g01269 487 FunFam Carboxypeptidase 382 477 - -
Pte12g01269 487 ProSitePatterns Serine carboxypeptidases, serine active site. 200 207 IPR018202 GO:0004185
Pte12g01269 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 57 464 IPR001563 GO:0004185|GO:0006508
Pte12g01269 487 SUPERFAMILY alpha/beta-Hydrolases 54 480 IPR029058 -
Pte12g01269 487 Gene3D - 336 373 - -
Pte12g01269 487 FunFam Carboxypeptidase 52 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01269 Pte-Chr12 34949514 34954411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01269 322 480 Calmodulin-binding Proteins AT2G22960 27.673 5.52e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01269 K16297 - tcc:18608498 663.299