Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01250 ATGGCTCCAGAATATGCATCAAGTGGGAAACTGACAGACAAATCTGACGTGTTTTCATTTGGGGTTGTCCTTTTGGAGCTTGTAACCGGAAGGAAGTCTGTTGATCCAAATCAGCCCTTGGGAGAAGAAAGTTTAGTTGAATGGGCTCGTCCTTACCTTATTAATGCCATTGAGACTCGTAACTTGAGTAAGTTGGTAGATCCAAGGCTTAAAAACAATTACGTCGAGGACGAGATGTTCAGAATGATCGAGTCCGCAGCAGCATGTATTCGCCATTCTGCTCCGAAACGGCCACGCATAGTTCAGGTTATGAGGGCCTTAGATAGTGAAGCAGCAACAAATGATCTATCTAATGGGTTCAAATATGGACACAGCACAATTTATGATTCTGGTCAATATAATCAAGATATATTAAGATTCAGGCAGATGGTACACGGCAGTTTTGACTTTGACATGTACAGTGAAGAATACATTTCCAGAGATTCAGCTCAACGCCAATAG 501 0.4212 MAPEYASSGKLTDKSDVFSFGVVLLELVTGRKSVDPNQPLGEESLVEWARPYLINAIETRNLSKLVDPRLKNNYVEDEMFRMIESAAACIRHSAPKRPRIVQVMRALDSEAATNDLSNGFKYGHSTIYDSGQYNQDILRFRQMVHGSFDFDMYSEEYISRDSAQRQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01250 166 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 143 IPR047117 -
Pte12g01250 166 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01250 166 Pfam Protein tyrosine and serine/threonine kinase 1 106 IPR001245 GO:0004672|GO:0006468
Pte12g01250 166 SUPERFAMILY Protein kinase-like (PK-like) 1 106 IPR011009 -
Pte12g01250 166 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01250 Pte-Chr12 34480958 34481835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01250 1 162 Trihelix Transcription Factor Family AT1G70460 67.879 1.22e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte12g01250 PK_Tyr_Ser-Thr 5.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01250 - - mcha:111019170 244.973