Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01244 ATGGAAGAACAACTCAGTCCATTGGCTGTCACTCATCTTCTCCAACATACACTGAGGAGCTTGTGCATTCAGGATAATTCTCAGTGGGTTTATGCCGTCTTTTGGAGGATCTTACCAAGAAACTACCCACCTCCCAAGTGGGATGGCCAAGGTGCATATGATCGGTCAAGAGGAAATAGAAGGAACTGGATATTAGTATGGGAAGATGGTTTCTGCAATTTTGCTGCTTCATCGGCTGCTGAGATGAACTCTGGTGACTGTCCCAGCTCCTCAGTTTACGGGAACTGTGAGTTCCGGCACTACCAAGGGCTGCAACCAGAGCTCTTCTTCAAGATGTCTCATGAGATCTACAACTATGGAGAAGGTTTGATTGGAAAAGTGGCTGCAGACCATAGTCACAAGTGGATATACAAAGAACCAAATGATCAAGAAATTAATTTCTTGTCAGCATGGCATAACACTGCAGACTCCCATCCTCGGACTTGGGAAGCACAGTTCCAGTCTGGTATAAAGACCATAGCTCTCATTGCTGTAAGAGAAGGCGTCGTTCAATTAGGAGCTGTGCACAAGGTTATTGAAGACCTCAGCTACGTGGTTTTGTTAAGAAAGAAATTCAGTTACATTGAGAGCATCCCCGGTGTTCTTCTGCCACACCCATCATCTTCTGGATTTCCTTTTAAAATGGAAGGTTATGGTGCCCCAGAGGCATGGCATTTCCAAAGCACTCTTGCTGCACCTCCAAATGAGTTGTACGACCATCTGGTCCAGCCAATGAAGATAACCCCATCCATGAGTAGCCTTGAAGCCCTTCTCTCAAAGCTTCCTTCTGTGGTACCACCTGCTCATCAACTTCCAGTACAGCAACAACCCCACTTTGTTCAATTCCAAAGGCCTGCCTTAGAGTTAATGGCATTGCAGACGAAAGTGGCTAAGGAAGAAGTTGATGAGGAAGTCTATAGGCCTGAATTGGATGTGGGAGAGAGTAGCAGTTCAATGCATGGTTACTGTCATCAGCAGCATTTTCATCATCATCAAGATCCTCATCAAGATTTTAACTAG 1059 0.4533 MEEQLSPLAVTHLLQHTLRSLCIQDNSQWVYAVFWRILPRNYPPPKWDGQGAYDRSRGNRRNWILVWEDGFCNFAASSAAEMNSGDCPSSSVYGNCEFRHYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNTADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSGFPFKMEGYGAPEAWHFQSTLAAPPNELYDHLVQPMKITPSMSSLEALLSKLPSVVPPAHQLPVQQQPHFVQFQRPALELMALQTKVAKEEVDEEVYRPELDVGESSSSMHGYCHQQHFHHHQDPHQDFN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01244 352 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 239 - -
Pte12g01244 352 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01244 Pte-Chr12 34355463 34357901 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01244 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.771 6.16e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01244 - - qsa:O6P43_025325 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01244 12 34355463 34357901 Pte12g01244 12 34355463 34357901 RCT