Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01235 ATGACTGCAGAAGACGAGAGTGAAACGAAGCATCTAGAATCTCTCGAAGGAGCCAACACCCGTCTTCGTCTCTTCCAAATTGACCTCCTTAACTATTACACTATTCTCGCAGCTGTTCAAGGCTGCTCTGGCGTTTTTCACCTTGCCTCTCCTTGTATTGTCGATCACGTTCAAGACCCTCAGAAGGAGCTTCTTGATCCTGCAATTAAAGGTACGCAGAACGTGTTGAAGGCATCGAAGGAAGCTGGGGTGAAGCGCGTAGTGATCACGTCCTCGGTTTCAGCCATCACTCCAAGTCCCAAATGGCCATCTGATGTTGTCAAGAGCGAGGATTGTTGGACTGACGTTGAATACTGCAAACAGAAGGAGTTATGGTATCCAATGTCGAAAACGCTGGCTGAGAAGGAGGCTTGGGAATTCGCCAGAAACTCTGGTTTAGATGTGGTGGTGGTGAATCCTGGTACTGTGATGGGTCCTGTCATTTCACCCAAACTCAATGCTAGTATGGTAATGCTTGTACGCCTCCTCCAAGGCTGCACCGAAACTTATGAGGATTTTTTCATGGGATCTGTACATTTTAAAGATGTGGCCTTAGCACACATTTTAGTGTATGAGAACAAAGCTGCAACGGGGAGGCATATATGTGTAGAAGCTATTTCTCACTATGGTGATTTTGTAGCTAAAGTTAATGAATTGTACCCAGAGTATAAGGTTCCTAGTTTGCCCAGAGATACTCAACCAGGGTTGATGAGAGCAAAGGATGGATCCAAGAAGCTGATAGATCTTGGCCTTCAATTCATTCCGATGGAACAAATTATTAAGGATGCAGTGGAATGTCTGAAGAGCAAGGGTTTTATCTCTTAA 864 0.4502 MTAEDESETKHLESLEGANTRLRLFQIDLLNYYTILAAVQGCSGVFHLASPCIVDHVQDPQKELLDPAIKGTQNVLKASKEAGVKRVVITSSVSAITPSPKWPSDVVKSEDCWTDVEYCKQKELWYPMSKTLAEKEAWEFARNSGLDVVVVNPGTVMGPVISPKLNASMVMLVRLLQGCTETYEDFFMGSVHFKDVALAHILVYENKAATGRHICVEAISHYGDFVAKVNELYPEYKVPSLPRDTQPGLMRAKDGSKKLIDLGLQFIPMEQIIKDAVECLKSKGFIS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01235 287 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 277 - -
Pte12g01235 287 CDD FR_SDR_e 4 264 - -
Pte12g01235 287 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 204 IPR002225 GO:0003854|GO:0006694|GO:0016616
Pte12g01235 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 280 IPR036291 -
Pte12g01235 287 Gene3D - 1 287 - -
Pte12g01235 287 FunFam Cinnamoyl-CoA reductase 1 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01235 Pte-Chr12 34020986 34023076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01235 4 288 Monolignol Biosynthesis Gene Families AT5G58490 76.842 1.54e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01235 - - adu:107458329 499.975