Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01230 ATGGAAAAAGATGTCTCTATTACTTCTCATACATGGGATGGAGAAAACAGCCATTCTTCTGGATCTGGCTTGGAGAAAACGATCAAACTATTTGGGTTTGAACTTAACCCTACAATGAAAAACAAAGACCCCCACAAAGGGTGTATGGAGGTTAGTGAAGAAAGTGTGAATTCCTCAACATCGGTTTCATCTGGAGTAGAGCCACAGGATGATGACAAGAAGAAAGGCGCCGCTGGGGTTGACACAGCTGAGAGGAAGCTTGAGTGTCAATATTGTTTCAAACAGTTTGCCAATTCACAAGCTCTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGAATGAAGAAGAAAAGACTTCAGCTTCAAGCCAGGAAGTCCAGCCTAAGTCCTTACCTTCAGCCTTTGCAAAACAGCCATGGTTTTACTTACCATGAAGCTACAGTACCATGGTGCTATGATCCTTCTTCATTAAATAGTTCTGAGTTCACTCTTTTTGAAGAGTCTCAGATTTGCTTCGGTACTGAAGCAGTCAATCCTAAGAACTCAGCTCCTAGGTTTAATTGGTATAGCAATCAAACACCTCATGCCTTATCCCTGCAAGACTCATCCATGTTCTCAATGACACACAGAACCAACAAAGCCAAAGATAATTGGCCTTTGGTCTACAAGCCTTCTCCTCTCCCTGCTTCAAAGCTGAACCACAGGAAAGCTTTGGATCTTCAGTTAAGCCTTAGTTTGCAGTCAGATAGCAGAAGGAGCATATAG 765 0.4248 MEKDVSITSHTWDGENSHSSGSGLEKTIKLFGFELNPTMKNKDPHKGCMEVSEESVNSSTSVSSGVEPQDDDKKKGAAGVDTAERKLECQYCFKQFANSQALGGHQNAHKKERMKKKRLQLQARKSSLSPYLQPLQNSHGFTYHEATVPWCYDPSSLNSSEFTLFEESQICFGTEAVNPKNSAPRFNWYSNQTPHALSLQDSSMFSMTHRTNKAKDNWPLVYKPSPLPASKLNHRKALDLQLSLSLQSDSRRSI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01230 254 PANTHER ZINC FINGER PROTEIN 5 16 247 IPR044299 GO:0010090
Pte12g01230 254 MobiDBLite consensus disorder prediction 1 23 - -
Pte12g01230 254 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Pte12g01230 254 Gene3D Classic Zinc Finger 71 138 - -
Pte12g01230 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Pte12g01230 254 MobiDBLite consensus disorder prediction 52 66 - -
Pte12g01230 254 MobiDBLite consensus disorder prediction 41 79 - -
Pte12g01230 254 SUPERFAMILY beta-beta-alpha zinc fingers 83 114 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01230 Pte-Chr12 33820616 33821736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01230 25 173 C2H2 Transcription Factor Family AT1G10480 39.375 1.47e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01230 - - qsa:O6P43_033118 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01230 12 33820616 33821736 Pte12g01230 12 33820616 33821736 RCT