Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01211 ATGGATGAAGACAACAACTATCTCTTCCCAACAGATACAGATCTAGACCTGAGCTTTACAAGCTGTGCTTCCATAGCTACTGACCGTACCTTCGCTTCTTCTAGTGCTCGTAGCAGTTTAGCTCGAAGTAGCTTAACCCTTAGATTCAATGAGTCTAGGCTCTTTACAACTTTAACCACCACCACCACCTCTTCAACTGCGTACACCATAAAAGTAGCTACCACTCTTTCCTCTGATGGCAGACTTCATCTCCACTACCTCAAACTTCTTCGCCATCTGGGTACTGGGAACCTTAGCCGAGTCTTCCTTTGCCAACTCAGAGACAATGACCACGCCAACTTTGCTCTCAAAGTAGTATACAAGGACGCATTGAGCAACAAGAAGCTCTCACATGTACAGACAGAAGCTGAGATTCTCTCCATGCTCGACCATCCTTTTCTTCCAACACGCTATGCTCACTTTGAGGTCTCACATTACACATGTCTCTTGATTGATTACTGTCCCGGGGAAGACCTCTACTATCTCCTTCTCACATTACACATGTCTCTTGATTGA 555 0.4523 MDEDNNYLFPTDTDLDLSFTSCASIATDRTFASSSARSSLARSSLTLRFNESRLFTTLTTTTTSSTAYTIKVATTLSSDGRLHLHYLKLLRHLGTGNLSRVFLCQLRDNDHANFALKVVYKDALSNKKLSHVQTEAEILSMLDHPFLPTRYAHFEVSHYTCLLIDYCPGEDLYYLLLTLHMSLD* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01211 184 ProSiteProfiles Protein kinase domain profile. 87 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01211 184 SUPERFAMILY Protein kinase-like (PK-like) 64 178 IPR011009 -
Pte12g01211 184 Gene3D Phosphorylase Kinase; domain 1 70 182 - -
Pte12g01211 184 PANTHER FLIPPASE KINASE 1-RELATED 44 176 - -
Pte12g01211 184 Pfam Protein kinase domain 89 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01211 Pte-Chr12 33340224 33340814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01211 1 176 AGC Kinase Gene Family AT1G53700 63.684 2.01e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte12g01211 Pkinase 3.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01211 - - qsa:O6P43_029306 230.335