Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01207 ATGAGAAATGGATGGGAAAGGATATCTGGGAATTCAAGATCGAGGTTGGGTAGAGATTCACAGCCTCTCAATAACATATCTTCGAGTCGTTCGATTCGACTCGGTCGAGTTCAGCCTCAGGCTCCTGGTCACCGTACCGTCTTCTGCAATGATCGTGAAGCCAATGCTCCAGTGAAATTCAGGGAGAATTCAATATCAACTACGAAGTACAACGTTCTCACTTTTTTGCCGAAGGGACTATTTGAACAATTCAGGAGGGTGGCTAATCTCTACTTTCTTACCATATCCATTTTGTCAACAACACCAATGAGTCCTGTATCTCCTATAACGAATGTGGTCCCTCTTAGTTTGGTGCTTCTCATCTCCCTTATAAAGGAAGCTTTTGAAGATTGGAAGCGTTTTCAAAATGACATGGCAATAAACAACAATTTGATAGAAGTGTTGCAAGATCATAAATGGGAGCCTATTCCATGGAAGAAGCTGCAGGTTGGAGACGTTGTCAAGGTTAAGCAGGACGCTAACTTCCCTGCAGACCTTCTTTTCCTTGCTAGTACCAACCCTGATGGTGTTTGCTACATAGAGACAGCAAATTTGGATGGCGAGACCAATTTAAAGATCAGAAAAGCCTTAGAGAAGACTTGGGATTACTTGACACCTGACAAGGCATCAGAATTTAAAGGTGAAGTGCAGTGTGAACAGCCAAACAATTCATTGTATACTTTCACTGGCAATCTTATAATTCAAAACCAGACATTGCCTATATCTCCAAACCAGATTTTATTACGAGGATGCAACCTCAGAAATACAGACTACATTGTTGGCACTGTTATTTTTTCAGGACATGAAACAAAGGTTATGATGAATTCCATGAATGTACCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCTTGCTCTTTGGTGTTCTAGTGATGATGTGTGTCATTGGTTCCATTGGCAGTGGGCTTTTTGTGAATAAGAAGTATTACTACCTACAACTTACTGATGGGGATGACAGCCAGTTCAACCCAAAAAATAGATTTGTGGTTATTATTCTGACTATGTTTACACTTATCACACTGTACTCCACAATCATTCCCATTTCACTTTATGTGTCCATTGAGATGATCAAGTTTATCCAGTCTACTCAATTCATCAACAAGGACTTAGCAATGTACCACAAAGAGTCCGACACCCCAGCATTGGCTAGGACATCCAATCTAAATGAGGAACTTGGGCAGATAGAATACATATTTTCGGATAAAACAGGAACTCTGACGAGAAACCTGATGGAGTTCTTCAAGTGTTCAATTGGTGGAGAGGTCTATGGAACTGGGATTACTGAAATTGAAAGAGGAATAGCACAGCGCAATGGCATGCCAGTTGAGGAACATATTCCAGAAAATGCAAGACGTGACAAGGGGTTTAACTTTGATGATGCTCGGCTTATGCGTGGAGCTTGGAAAAATGAAGCCAATCCTGATATGTGCAAGGAATTCTTCAGATGCCTGGCCATTTGTCATACAGTGCTTCCTGAGGGCGATGAATCACCTGAGAAAATCAAATACCAAGCTGCATCACCAGATGAGGCTGCTTTGGTCACCGCTGCAAAAAACTTTGGTTTCTTCTTTTTCAGACGCACACCTACTGCAATACATGTTCGTGAATCTCATGTTGAGAGTATTGGTAACATGCAAGATGAAGTGTATGAGATTCTGAATGTTCTGGAGTTCAACAGCGTAAGAAAGCGCCAGTCTGTTGTATGCCGTTATCATGATGGAAGGCTTGTCTTATACTGCAAGGGTGCTGACACTGTTATATTTGAAAGACTGGCTGAAGGGCAAAATGATATGAAAAAAGTGACGAAAGAGCACTTGGAACAGTTTGGTTCTGCAGGATTACGAACGCTATGTCTGGCTTATAAAGATTTAAGTCCTGCTGTATATGAAAGCTGGAATGAGAAGTTTGTCCAGGCTAAGTCTTCTCTTCGAGATCGAGAAAAAAAGTTAGATGAGGTTGCGGAATTCATAGAATGTGATCTTATTCTGATTGGGTGCACTGCCATAGAAGACAAACTTCAAGAAGGAGTGCCAGACTGCATCCAGACACTGTCTAGAGCTGGAATTAAAATTTGGGTTCTAACGGGGGACAAGATGGAAACAGCAATAAACATAGCTTATGCATGTAACCTGATCAATAATGAAATGAAACAGTTTGTTATCAGTTCAGAAACTCAGGCTATAACAGAAGTGGAAGACAGGGGTGATCAAGTAGAAATTGCACGCTTCATCAAAGAAGAAGTGAAGAAAGAGCTGAAGAAGTATCTTGATGAACAACGGCTGCTCCTAAACACTCTATCTGGACCAAAATTAGCACTAGTAATTGATGGAAAATGTTTGATGTATGCGTTGGATCCAAGTTTAAGAGTTCTACTTCTAAACTTGAGCCTGAATTGTGATTCAGTTGTATGCTGCCGAGTTTCCCCACTTCAGAAGGCTCAGGTTACAACTCTGGTTAAGAAAGGTGCTAACAAGATAACACTTAGTATTGGTGACGGTGCCAATGATGTCAGCATGATTCAGGCTGCTCATGTCGGTGTTGGTATAAGTGGGCTTGAAGGGATGCAAGCAGTCATGGCTAGTGACTTTGCTATTGCTCAATTTCGTTTTCTTGCAGACTTACTTCTTGTTCATGGACGCTGGTCTTACATCAGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAACCTAACGTTCACTCTCACTCAGTTCTGGTTTACTTTTCAAACCGGATTCTCTGGTCAGAGGTTCTATGATGATTGGTTCCAGTCTTTATATAATGTCATTTTCACAGCCCTGCCTGTGGTTGTTGTTGGACTCTTCGACAAGGATGTGAATGCGCACCTTTCTAAGAAGTACCCTGAACTATATGGAGAGGGAATAAGGAATGTTTTCTTCAAATGGAGAGTTGTGGCAGTTTGGGCTTTCTTTTCTATCTATCAGTCTCTAATTTTATACTATTTTACTACCAATTCAAGTTTAAGTGCCAAAAATAGAGACGGAAAAATGTTTGGGCTCTGGGATGTGAGTACGGTAGCTTTCACATGCATTGTTGTCACTGTCAATGTGAGGCTGCTTCTCAGTTGTAATTCAATTACAAAATGGCATCACATTAGCGTTGGAGGAAGCATACTGGCATGGTTTGTTTTTGCTTTCTTTTACTCGGGAATATCTACCACGTTTGATAGACAGGAGAATATCTATTTTGTTATATACGTTTTGATGAGCACATTTTACTTCTACTTCACCCTTCTTCTAGTCCCTATTGTTGCACTATTTGGTGACTTCATTTATCTTGGGGTCCAAAGATGGTTCTACCCGTATGATTACCAGATTATTCAGGAGATGCATAGGAATGATGCTGATAATTATGGCAGAGCACAGTTGCTGGAGATTGAGAACCGGCTTACTCCAGCTGAAGCTAGGAGCTTCGCCATAGCTCAACTTCCACGCGAAGGGTCGAAGCACACTGGCTTTGCTTTTGATTCACCTGGATATGAATCATTTTTCGCTGCACAGCTAGGCATCCATGCTCCACAAAAAGCATGGGACGTTGCAAGGAGAGCAAGTGTGCGTTCTAAACAGAAGAAAGCCCCTAAATAG 3678 0.413 MRNGWERISGNSRSRLGRDSQPLNNISSSRSIRLGRVQPQAPGHRTVFCNDREANAPVKFRENSISTTKYNVLTFLPKGLFEQFRRVANLYFLTISILSTTPMSPVSPITNVVPLSLVLLISLIKEAFEDWKRFQNDMAINNNLIEVLQDHKWEPIPWKKLQVGDVVKVKQDANFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPDKASEFKGEVQCEQPNNSLYTFTGNLIIQNQTLPISPNQILLRGCNLRNTDYIVGTVIFSGHETKVMMNSMNVPSKRSTLERKLDKLILLLFGVLVMMCVIGSIGSGLFVNKKYYYLQLTDGDDSQFNPKNRFVVIILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLAMYHKESDTPALARTSNLNEELGQIEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAQRNGMPVEEHIPENARRDKGFNFDDARLMRGAWKNEANPDMCKEFFRCLAICHTVLPEGDESPEKIKYQAASPDEAALVTAAKNFGFFFFRRTPTAIHVRESHVESIGNMQDEVYEILNVLEFNSVRKRQSVVCRYHDGRLVLYCKGADTVIFERLAEGQNDMKKVTKEHLEQFGSAGLRTLCLAYKDLSPAVYESWNEKFVQAKSSLRDREKKLDEVAEFIECDLILIGCTAIEDKLQEGVPDCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSETQAITEVEDRGDQVEIARFIKEEVKKELKKYLDEQRLLLNTLSGPKLALVIDGKCLMYALDPSLRVLLLNLSLNCDSVVCCRVSPLQKAQVTTLVKKGANKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRFLADLLLVHGRWSYIRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVVVVGLFDKDVNAHLSKKYPELYGEGIRNVFFKWRVVAVWAFFSIYQSLILYYFTTNSSLSAKNRDGKMFGLWDVSTVAFTCIVVTVNVRLLLSCNSITKWHHISVGGSILAWFVFAFFYSGISTTFDRQENIYFVIYVLMSTFYFYFTLLLVPIVALFGDFIYLGVQRWFYPYDYQIIQEMHRNDADNYGRAQLLEIENRLTPAEARSFAIAQLPREGSKHTGFAFDSPGYESFFAAQLGIHAPQKAWDVARRASVRSKQKKAPK* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01207 1225 Coils Coil 769 789 - -
Pte12g01207 1225 Pfam E1-E2 ATPase 145 378 - -
Pte12g01207 1225 Gene3D - 533 676 IPR023299 GO:0000166
Pte12g01207 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pte12g01207 1225 SUPERFAMILY Calcium ATPase, transduction domain A 143 286 IPR008250 -
Pte12g01207 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1132 IPR023298 -
Pte12g01207 1225 Pfam Cation transport ATPase (P-type) 521 614 - -
Pte12g01207 1225 Gene3D - 684 894 IPR023214 -
Pte12g01207 1225 FunFam Phospholipid-transporting ATPase 687 894 - -
Pte12g01207 1225 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Pte12g01207 1225 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pte12g01207 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 882 1132 IPR032630 -
Pte12g01207 1225 SUPERFAMILY HAD-like 418 910 IPR036412 -
Pte12g01207 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 693 IPR023299 GO:0000166
Pte12g01207 1225 FunFam Phospholipid-transporting ATPase 531 686 - -
Pte12g01207 1225 FunFam Phospholipid-transporting ATPase 121 290 - -
Pte12g01207 1225 NCBIfam phospholipid-translocating P-type ATPase 60 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte12g01207 1225 Pfam Phospholipid-translocating ATPase N-terminal 47 111 IPR032631 -
Pte12g01207 1225 SFLD p-type atpase 405 905 IPR044492 -
Pte12g01207 1225 MobiDBLite consensus disorder prediction 1 26 - -
Pte12g01207 1225 NCBIfam HAD-IC family P-type ATPase 827 933 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte12g01207 1225 CDD P-type_ATPase_APLT_Dnf-like 63 1014 - -
Pte12g01207 1225 SFLD Haloacid Dehalogenase 405 905 - -
Pte12g01207 1225 FunFam Phospholipid-transporting ATPase IC 420 432 - -
Pte12g01207 1225 Gene3D - 125 289 - -
Pte12g01207 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01207 Pte-Chr12 33163943 33193875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01207 19 1226 Primary Pumps ATPases AT1G59820 77.254 0.0 1993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01207 K14802 - qsa:O6P43_025377 2033.84