Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01197 ATGGTGAAAGTGGATTATTACACTGTGCTGAAGGTGAACAAGAATGCAACAGAGGAAGAGGTGAGGAAGGCATACAAGAGACAGGCCATGCAGTGGCACCCAGATAAGAACCAGCAAGACCCAGTTAAGACAGAACAAGCAGAGGCCAAGTTCAAGCAGATTTCTGAGGCTTATGATGTCCTTAGTGATCCAAAGAAGCGTCAAATCTACGATCAGTATAGTCGTTCAGATCTCAATTCTCAATGGGGTTTCAGGAAAAACAGTAGTGAGCATGTTGGGAATCAGATAACCAAGAGGGCACAATCTATTGAGACTAAACTGGTGTGTACCCTTGAAGAACTTTATATTGGTTGCAGAAAGAAGTTGAAAATCTCAAGGACTGTACGTGATCGATTCGGGAAGCTGACCATTGAGGAAGAAACTTTGAAGATTGTCGTCAAACCTGGTTGGAAGAAAGGCACAAAGATCACTTTTCCAGAGAAAGGAAACCGTGAGTCAGGAATGGCTCCTGGTGATATCATTGTTGTCGTGGATGAGGAACCTCATGATGTGTTTCAAAGGGATGGAAACGATTTGTTGATGACTATAAAGGTTTCACTTTTCGAGGCTCTTGGAGGGAAGACATTAAATTTGACTACTTTGGATGGGAGGGATATCAAAATTTCACTTAAAGATCAGTTGGTGATACCAAATGAGGGGATGCCTTATTCAAAGGATCCTAGCAAGAAAGGGAAGCTCCGGATTAAATACGATCTTGATTTTCCTTCGGCGGTGACAATGCAGCAGAAGAAGGATGATCTGAGAAGGATTCTGAGGGAAGCTAGTTATTGA 831 0.426 MVKVDYYTVLKVNKNATEEEVRKAYKRQAMQWHPDKNQQDPVKTEQAEAKFKQISEAYDVLSDPKKRQIYDQYSRSDLNSQWGFRKNSSEHVGNQITKRAQSIETKLVCTLEELYIGCRKKLKISRTVRDRFGKLTIEEETLKIVVKPGWKKGTKITFPEKGNRESGMAPGDIIVVVDEEPHDVFQRDGNDLLMTIKVSLFEALGGKTLNLTTLDGRDIKISLKDQLVIPNEGMPYSKDPSKKGKLRIKYDLDFPSAVTMQQKKDDLRRILREASY* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01197 276 CDD DnaJ_C 101 256 - -
Pte12g01197 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 264 IPR008971 GO:0006457|GO:0051082
Pte12g01197 276 CDD DnaJ 5 63 IPR001623 -
Pte12g01197 276 Gene3D - 105 181 - -
Pte12g01197 276 Gene3D - 182 256 - -
Pte12g01197 276 SMART dnaj_3 4 66 IPR001623 -
Pte12g01197 276 Pfam DnaJ domain 5 71 IPR001623 -
Pte12g01197 276 Gene3D DnaJ domain 2 104 IPR036869 -
Pte12g01197 276 FunFam DnaJ subfamily B member 13 182 256 - -
Pte12g01197 276 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
Pte12g01197 276 PRINTS DnaJ domain signature 25 40 IPR001623 -
Pte12g01197 276 PRINTS DnaJ domain signature 7 25 IPR001623 -
Pte12g01197 276 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pte12g01197 276 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pte12g01197 276 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 271 - -
Pte12g01197 276 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Pte12g01197 276 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Pte12g01197 276 Pfam DnaJ C terminal domain 103 255 IPR002939 -
Pte12g01197 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 103 183 IPR008971 GO:0006457|GO:0051082
Pte12g01197 276 FunFam Dnaj homolog subfamily b member 99 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01197 Pte-Chr12 33020785 33021715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01197 6 73 C2H2 Transcription Factor Family AT1G74250 42.029 7.51e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01197 K09510 - qsa:O6P43_033076 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01197 12 33020785 33021715 Pte12g01197 12 33020785 33021715 RCT