Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01172 ATGATTATAATAATTGTCCAAACCACTGTTGGCTTCAAACATAGTCAATATTATGGAACCACAGCTGGTATGCTTTTCTTGCTTGTTCTTCCAATATACATCGTTATTTTGGAGGAATATAAATTCCTGAAGAACAGTAGTACTGGAGATCCTCCTCAACCGCTAAAGATTCTTACTGATAAGCCAGTTCAGCAGAAATCTCCTCCTGTTCCTTTAGCTGAACAAAAACTCCAAACAAGAACTTCATGTTGGAGTACCATACTTAGACCCCCAACTAGAGGTGAAGACTATACAATACTTCAAGCTGTTTTTAGCATTGATATGATGGTTTTATTCTTGTCTACAATATGCGGTATTGGTGGTACTTTGTCTGTGGTGAATAACTTGGGTCAAATTGGTACTTCTCTAGGATACCCTCCTCACAGTGTAACAACATTTGCGTCTTTATTGAGCATATGGATTTACCTTGGAAAAGTTGTGGTAGGGATACTCTCAGAACATGTCATAACCAAGTTTAAAGTCCCTCGTCCTCTTGTGCTGACTTTACTTCTGTTGCTTTCATGCGTCGGTCACCTCCTCATTGCATTTGATGTCTCCAACGGCCTCTATGTTGCCTCAGTAGCGATCGGTTTCTGTTTTGGAGCAACGTGGCCAATGCTCTTCACAATAATATCTGAATTATTTGGTCTCAAGTACTACTCAACCTTATACAACATTGGATCTATGGCAAGTCCAGTTGGTTCATATTTGATGAACGTGAGAGTGGTTGGACATTTGTACGACAAAGAGGCTAAGAAGAAACTGGCCGCATTAGGGATCCAAAGAAAGCCAGGAGAGGAATTGAATTGCAATGGAGTTGAGTGTTTCAAACTGTCTTTCCTTATTGTCACTGGGGTGACTTTGTTTGGTGCACTAGTTTCACTCATTTTGGTCTACAGGACTAGAAAGTTTTATCAAAGTGACATATACAGGAAGTTCAGGGAGGAGAGCAAAGCTACTGAAACAGAAATGGCATTGCCAAAGAATGGTGTTGAAAACAATTGA 1044 0.4004 MIIIIVQTTVGFKHSQYYGTTAGMLFLLVLPIYIVILEEYKFLKNSSTGDPPQPLKILTDKPVQQKSPPVPLAEQKLQTRTSCWSTILRPPTRGEDYTILQAVFSIDMMVLFLSTICGIGGTLSVVNNLGQIGTSLGYPPHSVTTFASLLSIWIYLGKVVVGILSEHVITKFKVPRPLVLTLLLLLSCVGHLLIAFDVSNGLYVASVAIGFCFGATWPMLFTIISELFGLKYYSTLYNIGSMASPVGSYLMNVRVVGHLYDKEAKKKLAALGIQRKPGEELNCNGVECFKLSFLIVTGVTLFGALVSLILVYRTRKFYQSDIYRKFREESKATETEMALPKNGVENN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01172 347 Gene3D MFS general substrate transporter like domains 99 319 IPR036259 -
Pte12g01172 347 Pfam Major Facilitator Superfamily 20 245 IPR011701 GO:0022857|GO:0055085
Pte12g01172 347 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 324 - -
Pte12g01172 347 SUPERFAMILY MFS general substrate transporter 23 317 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01172 Pte-Chr12 31433954 31435331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01172 1 329 Nodulin-like Gene Family AT2G39210 58.754 4.65e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01172 - - qsa:O6P43_008652 501.516