Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01167 ATGAAGAACATTTTGTTGTTAGTCCATTTCTGGTTTCCTGTGATATTATGTATTTTGCATTCTTCAATTTCCTTAGCACAATTGTCACCGAGTGAAACTCGAATCTTGTTCCAAGTTCAAAAGCTTCTTGAATATCCTCCAGCTCTTCAGGGCTGGAATAACTGGACTAACTTCTGCTACCTCCCACCCTCATCTTCTGTCAAAGTTGTCTGTCACAACAATCATGTAACGGAGTTAACCATTGTTGGAAACAAGAACCCTCCACCTCGCTCTGCAAAACAATCTTCTCTGAAATCTGTTGTTTCCAATCAAACATTGTCAGCAACATTCTCTATTGATAGCTTCTTCACTGTTCTGACAAAGCTCTCAAACTTGAGATTACTGTCCTTGGTATATTTGGGCATGTGGGGTCCTTTTCCATCAAAAATCAGCAGGCTGTCAGAACTAGAGGTCCTCAATATAAGCTCAAATTTCATCTATGGAGCGATCCCTTCATCAATATCATCGTTGACAAACATTACAAGTCTGGTCTTGGCTGATAACATGTTGAATGGGAGTGTCCCAGATCTTCAAAAGCTGACACTTCTTCAAGAGCTGAATTTGGGCAACAACTACCTTGGACCTGCGTTTCCCTCAATTCCCAACTACCTCGTAAGTATCATATTGAAGCAAAATTCCCTGAGATCTAGGATTCCTTCCATGATTCTGCATTTAGATAAGCTGCAACAGTTTGACATATCTTCAAATAAATTTGTTGGACCAATCCCATCTTCTGTGTTCTCTCTGCCTTCCATTCAATCCCTCAACCTAGCTCAGAACCAATTGAGTGGTGCCCTTCTAGCGAACACAACCTGTGGCAAAGGGCTTCAGTTTGTAGATTTGTCGAACAACCTTTTGATAGGGAAAATACCAGCTTGCATTGAATCCAAATCTTCTATCCGTACTGTACTTTACTCCTGGAACTGTTTGTCTAGTAAGAACTTAAAATATCAGCATCCCCTTACATATTGTCAGAAAGAAGCCTTAGCAGTTAACCCCATGAAAAATCAGAAGCATGTGAATTCGGGTGTGAACATAGGTTTAATACTTGGCATAGCTGGCGGAATTGTGGCGCTTGCAGCCATTATTGTCTTGCTTTTTCTGGTGATCTTAAGGAAGTCTAAAGCGCAAGGAAAATATGAAGCGAGTCTTTATGGTGGATCTGTCGCTGACAAAGTTTCTGTCCGTAGCACCCCAAGACCAAACTTTAACATAAGACATGTCCCTCAGAGAATGAGGTCAGGAGCAGTAGGGCTCCCACCATATCGCAGTTTTACATTGGAGGAAATTGAAGATGCAACAAACAACTTTGACCCTCCAAATTTATTAGGAGAAGGATCTCAGGGAGAGTTATACAAAGGTTGGATCAGAAATGGTCCACAGGTGGTGGTAAACTGTATAAGACTAGATCAGAAGCACTCATCCCAGAAGCTCCTGCACCATATGGAGGTTTTAGCACAATTGAGACACCGTAACTTGGTCAGCATCCTCGGACATTGCATTCTAAATTACGAGGAACGTCCTAATGCAGCTAGCACAGTCTTCATTGTCCAAGAACATTTCTCAAATGGAACACTGAGAGGCCTTCTAAATGAACAGAGGAGGAAGACTCTAAATTGGCCACAGAGAATGGCTATTAGCATTGGCATTGCCAGAGGTGTTCAGTTCCTACACACAGGTGTCGCTCCTGGCATATTTGGAAATAATTTGAACACTGACAATGTTTTGATGGATGAGAGCCTGAATGCCAAAATTATTGGATATAAAATCTCCTTGCCATCTAAGAATGGCAATGAGGGTACACAAAATGATCATCATCAACTGGGGAGTCCTGAAAAGGAAGACATCTATCAGCTAGGTGTTATTTTGGTTCAAGTAATATCTGGTAAACAAATCACATCAGCAAGTGAATTGGAAGGGCTAAAGATTCAGATGGAAAAGGGTCTATTGGAGGCTCCATCGATATTAAGAGCTACAACTGATCCTTACATTCAGGGTACTTATGCATATGAATCATTGAGAACCACAGTTCAGATCACAATCAACTGTCTTTCCAAAGACTCAAATAAGCGCCCTCCAATAGAGGATGTTGTCTGGAATTTGCAATACTCAATGCAAGTCCAAGAAGGCTGGGCCAGCAGCGGAAACCTTGGCACAAAACTGTAA 2205 0.4154 MKNILLLVHFWFPVILCILHSSISLAQLSPSETRILFQVQKLLEYPPALQGWNNWTNFCYLPPSSSVKVVCHNNHVTELTIVGNKNPPPRSAKQSSLKSVVSNQTLSATFSIDSFFTVLTKLSNLRLLSLVYLGMWGPFPSKISRLSELEVLNISSNFIYGAIPSSISSLTNITSLVLADNMLNGSVPDLQKLTLLQELNLGNNYLGPAFPSIPNYLVSIILKQNSLRSRIPSMILHLDKLQQFDISSNKFVGPIPSSVFSLPSIQSLNLAQNQLSGALLANTTCGKGLQFVDLSNNLLIGKIPACIESKSSIRTVLYSWNCLSSKNLKYQHPLTYCQKEALAVNPMKNQKHVNSGVNIGLILGIAGGIVALAAIIVLLFLVILRKSKAQGKYEASLYGGSVADKVSVRSTPRPNFNIRHVPQRMRSGAVGLPPYRSFTLEEIEDATNNFDPPNLLGEGSQGELYKGWIRNGPQVVVNCIRLDQKHSSQKLLHHMEVLAQLRHRNLVSILGHCILNYEERPNAASTVFIVQEHFSNGTLRGLLNEQRRKTLNWPQRMAISIGIARGVQFLHTGVAPGIFGNNLNTDNVLMDESLNAKIIGYKISLPSKNGNEGTQNDHHQLGSPEKEDIYQLGVILVQVISGKQITSASELEGLKIQMEKGLLEAPSILRATTDPYIQGTYAYESLRTTVQITINCLSKDSNKRPPIEDVVWNLQYSMQVQEGWASSGNLGTKL* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01167 734 Gene3D Phosphorylase Kinase; domain 1 423 520 - -
Pte12g01167 734 ProSiteProfiles Protein kinase domain profile. 450 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01167 734 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 534 729 - -
Pte12g01167 734 Pfam Leucine Rich Repeat 289 308 IPR001611 GO:0005515
Pte12g01167 734 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 215 - -
Pte12g01167 734 SUPERFAMILY L domain-like 113 335 - -
Pte12g01167 734 Pfam Protein tyrosine and serine/threonine kinase 455 605 IPR001245 GO:0004672|GO:0006468
Pte12g01167 734 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 358 720 - -
Pte12g01167 734 SUPERFAMILY Protein kinase-like (PK-like) 430 714 IPR011009 -
Pte12g01167 734 Gene3D Transferase(Phosphotransferase) domain 1 534 726 - -
Pte12g01167 734 Gene3D Ribonuclease Inhibitor 29 350 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01167 Pte-Chr12 31181674 31185305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01167 24 658 Miscellaneous Gene Families AT2G02780 47.344 1.28e-172 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pte12g01167 PK_Tyr_Ser-Thr 1.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01167 - - cave:132179076 861.677