Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01152 ATGAGCAAGCTAAAACAACTCTATGCTATTGTTTCAGATACCACCAAACACATTCCCATGTCTAGAAAATACAAGAAGCTCATCTTGGTTATTTCTGCTACCTTATTTCTTGTTGCTGCCATTATCGGCATTGTTGCTGGTGTGAATTCTCACAACAAGTCAATTAATAATGCCACATCCATGTCTTCGTATGCCATAGTCAAAAGCTCATGTAGCAGCACATTATACCCTGAATTATGCTTCTCTACTATAGCCAATACTACAGCAGTAACCCAGTTCAAAATCACAAGCCAAAAGGATGTGATAGAATTATCTCTGAACTTAACCATTGAAGCAGTAAAGCACAACTATTTCAATATCAAGGAGCTTCTATTGACAAGAAAAAACTTGACAGAACGTGAGCAGACCGCTCTTCATGATTGCTTAGAAACCATAGATGAAACCCTTGAGGAGCTTCAGAAAGCTGAGGAAGATCTGAATGTGTATCCGAACAAGAAATCCTTGTACCAACATGCTGATGATCTTAAAACCGTAATAAGTTCTGCAATAACAAACCAAGTAACTTGCTTGGATGGTTTCTCATACGATGCAGCTGATAAACATGTCAGGGAAGCACTGCAACAAGGTGAGGTACATGTAGAGCATATGTGCAGCAATGCTTTGGCTATAATAAATTCCCGGTGGGTTGAGGAGATGCGCAGACTTCAACGAAGGTAG 717 0.3975 MSKLKQLYAIVSDTTKHIPMSRKYKKLILVISATLFLVAAIIGIVAGVNSHNKSINNATSMSSYAIVKSSCSSTLYPELCFSTIANTTAVTQFKITSQKDVIELSLNLTIEAVKHNYFNIKELLLTRKNLTEREQTALHDCLETIDETLEELQKAEEDLNVYPNKKSLYQHADDLKTVISSAITNQVTCLDGFSYDAADKHVREALQQGEVHVEHMCSNALAIINSRWVEEMRRLQRR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01152 238 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 225 IPR035513 -
Pte12g01152 238 PANTHER PECTINESTERASE 33 235 - -
Pte12g01152 238 NCBIfam pectinesterase inhibitor domain 61 225 IPR006501 GO:0004857
Pte12g01152 238 Coils Coil 138 165 - -
Pte12g01152 238 SMART PMEI_2 62 223 IPR006501 GO:0004857
Pte12g01152 238 Pfam Plant invertase/pectin methylesterase inhibitor 66 223 IPR006501 GO:0004857
Pte12g01152 238 CDD PMEI-like_3 69 228 - -
Pte12g01152 238 FunFam Pectinesterase 63 227 - -
Pte12g01152 238 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01152 Pte-Chr12 30806952 30807832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01152 42 224 Carbohydrate Esterase AT1G53830 66.304 1.25e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01152 K01051 - cave:132186541 290.812