Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01118 ATGGACCCATTTGAATCACTCGGCATGGAAGTAACAAACGCAAATGTAACCAGTCACAAGGGGCTTGTATCCCATGTTTTTAAAGTTGAGCAAAACTTCAGGTACTGCTCACTGGAGGAGAGGATCAAAATCCACCAGCAGGTTCTTTTGGGAGCCTTTTTTGACAGTACTGCTCATAAAGTTGTGGGTGGTATGCCACCACCCATTCCATCATCACAAGGAAATGTTCAAGTTGGTGACCAAAATCACCTGCCTAATGGTGGCCCCAGATTAGTAAATAGCCAGTCCACAACGGCAACATCATCATTGTATCCATCGGCTTCAATGGAACCCATATGTGGCCGCTCTGAAACAGTCCCGACTGAGGCTGCTGGGTCTTGTTCTTCGGCGGTCGAGCGCGACCTCTGGGATGTGGAGTGCTCCGCAATCTCGTCCTATGGAAGCTATGCTAGTTATATTGGCACAGGAAAAAGTCCAGAAATATCGACAACCGCCCAAGATAATGGCCTTCTCAATGAGTTAAACCAGACTGCTCCTTTGAGGCTTCAAATAGGAGGGCAGCTTCCATCCTTGCCTTACAATCTTAGTTGGAAACTTTGA 600 0.4717 MDPFESLGMEVTNANVTSHKGLVSHVFKVEQNFRYCSLEERIKIHQQVLLGAFFDSTAHKVVGGMPPPIPSSQGNVQVGDQNHLPNGGPRLVNSQSTTATSSLYPSASMEPICGRSETVPTEAAGSCSSAVERDLWDVECSAISSYGSYASYIGTGKSPEISTTAQDNGLLNELNQTAPLRLQIGGQLPSLPYNLSWKL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01118 199 PANTHER RGPR-RELATED 36 118 IPR024880 GO:0006914|GO:0048208
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01118 Pte-Chr12 29108993 29110466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01118 137 175 Type I MADS-box Gene Family AT2G03060 58.974 1.18e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01118 K20353 - qsa:O6P43_024344 91.2781