Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01098 ATGTACCCGAGAAGGTTTATCATCAGACGAAGGAGCCAATCGGCTTCAAGTCTTTGGGCCAAACAAGCTGGTATCAGGGAGGTACATTTCTTCACATTCAATCCTGTGGACAAGAGGACTGCTCTGACCTACATTGATTCTGATGGGAGTTGGCATCGTGCTAGCAAAGGTGCTCCTGAGCAGATAATAACCCTCTGCAACTGTAAAGAGGACGTCAAGAGAAAGGTCCATGCTGTCATCGACAAGCATGACAGTGCTGAAACAATTAGAAGAGCTCTAAACCTTGGCGTCAATGTTAAGATGATCACCGGTGATCAGCTTGCCATTGGAGATGGTGTCAATGATGCTCCTGCTTTGAAGAAAGCAGACATTGGCATTGCCGTTGCAGATGCAACTGATGCGGCTCGAGGTGCCTCTGACTCTATGGTTGTCTGTACCATGGAGGAGTCGGGTGAGCACATTGTTGCAGGTGCAGGAGAACTCCATCTCGAGATCTATTTGACTCAGGAGGAGACGAGATGA 522 0.4828 MYPRRFIIRRRSQSASSLWAKQAGIREVHFFTFNPVDKRTALTYIDSDGSWHRASKGAPEQIITLCNCKEDVKRKVHAVIDKHDSAETIRRALNLGVNVKMITGDQLAIGDGVNDAPALKKADIGIAVADATDAARGASDSMVVCTMEESGEHIVAGAGELHLEIYLTQEETR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01098 173 Gene3D Elongation Factor G (Translational Gtpase), domain 3 142 171 - -
Pte12g01098 173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 22 83 IPR023299 GO:0000166
Pte12g01098 173 Gene3D - 8 84 IPR023299 GO:0000166
Pte12g01098 173 SUPERFAMILY EF-G C-terminal domain-like 139 168 IPR035647 -
Pte12g01098 173 Gene3D - 85 108 IPR023214 -
Pte12g01098 173 Gene3D - 109 141 IPR023214 -
Pte12g01098 173 Pfam haloacid dehalogenase-like hydrolase 105 142 - -
Pte12g01098 173 SUPERFAMILY HAD-like 82 141 IPR036412 -
Pte12g01098 173 PANTHER CALCIUM-TRANSPORTING ATPASE 22 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01098 Pte-Chr12 28268100 28269100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01098 110 158 Primary Pumps ATPases AT2G24520 67.347 1.11e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01098 K01535 - gmx:100794372 154.066