Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01054 ATGAATGCCAACTCACCTATGTCCAAATCAAGAAGCCGAACCAGAACCCACGTAGGCAAATACGAGCTCGGTAAAACTTTAGGTGAGGGTAGTTTTGCGAAAGTCAAGTTCGCCAGGAATGTTGAGACCGGGGAGAATGTTGCCATCAAAATTCTCGACCGTGATCATGTGTTACAACACAAAATGGTCAACCAGATAAAGAAAGAGATATCAGCAATGAAGTTGATCAAGCATCCAAACGTAATTCGAATATTTGAGGTAATGGCAAGCAAAACGAAGATCTACATTGTACTGGAATTTGTTGATGGAGGAGAGTTATTTGACTTAATTGCCAAGCAGGGAAAACTTAAAGAAGAGGAAGCAAGATCATATTTCCAGCAGCTCATTAATGCTGTTGATTATTGCCACAGCAGAGGCGTATACCACAGAGATTTGAAGCCTGAGAATCTTCTTTTGGACGCACATGGCATGCTCAAAGTATCGGATTTTGGGTTGAGCACATTTTCGCAGCAAGAAGATGGGCTGCTTCACACTGCCTGTGGAACCCCAAATTATGTTGCTCCAGAGGTGCTTAATGATAATGGATATGATGGTACATCAGCAGATATATGGTCATGTGGTGTGATCCTGTTTGTACTTGTGGCTGGATTCTTGCCTTTTGATGACTCAAATATGATGGTTTTGTATAGAAAAATTGGCAGGGCTGATTTCACATGTCCACCATGGTTCTCATCTGGGGCAAAGAAATTGCTGAAGCGTATTCTTGATCCAAATCCTCTAACGCGAATAACGATCCCTGAAATCTTAGAAGATGAATGGTTTAAGAAAGGTTACAAGCGAGCTTTCTTTGAAGAGGAAAAGGATGTAAATCTTGATGACATAGATCTTGCTTTTGATGACTCTAAGGAAAAACTTTTGACAGAAAGAAAAGAGAAACCTGCTTCAATGAATGCTTTTGAGTTTATCTGTCGGTCTGACAGTTTCAATCTGGAAAATTTGTTTGAACAGAAGCAGAAGGCAACTGCAAAGCGAGAAACAAGTTTTACCTCACAGTTTCCTGCAAATGAAATTATTTCAAAAATAGAGGAAACTGCAAAGCCTCTTGGATTTAATGTACGAAAGCGGAATTACAAGATGAAGCTGCAAGGTGATAAGAATGGAAGAAAAGGCCAACTTAATGTGGCGACAGAGGTTTTTGAGGTTGCTCCCTCCTTGCACCTGGTGGAGCTGCGCAAAACCGGGGGTGACACTCTGGAGTTTCATAAGTTCTACAAAAGCTTTGCAACTGGACTACAAGGCATTATGTGGAAACAAGACGATCAAAGTGAATCAAGCTCATGA 1341 0.4101 MNANSPMSKSRSRTRTHVGKYELGKTLGEGSFAKVKFARNVETGENVAIKILDRDHVLQHKMVNQIKKEISAMKLIKHPNVIRIFEVMASKTKIYIVLEFVDGGELFDLIAKQGKLKEEEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDAHGMLKVSDFGLSTFSQQEDGLLHTACGTPNYVAPEVLNDNGYDGTSADIWSCGVILFVLVAGFLPFDDSNMMVLYRKIGRADFTCPPWFSSGAKKLLKRILDPNPLTRITIPEILEDEWFKKGYKRAFFEEEKDVNLDDIDLAFDDSKEKLLTERKEKPASMNAFEFICRSDSFNLENLFEQKQKATAKRETSFTSQFPANEIISKIEETAKPLGFNVRKRNYKMKLQGDKNGRKGQLNVATEVFEVAPSLHLVELRKTGGDTLEFHKFYKSFATGLQGIMWKQDDQSESSS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01054 446 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Pte12g01054 446 Gene3D Phosphorylase Kinase; domain 1 10 100 - -
Pte12g01054 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 422 - -
Pte12g01054 446 Pfam NAF domain 313 374 IPR004041 GO:0007165
Pte12g01054 446 CDD CIPK_C 317 427 - -
Pte12g01054 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pte12g01054 446 FunFam Non-specific serine/threonine protein kinase 14 315 - -
Pte12g01054 446 CDD STKc_SnRK3 20 273 - -
Pte12g01054 446 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Pte12g01054 446 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Pte12g01054 446 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01054 446 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Pte12g01054 446 SMART serkin_6 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01054 446 Gene3D Transferase(Phosphotransferase) domain 1 101 302 - -
Pte12g01054 446 FunFam Non-specific serine/threonine protein kinase 310 437 - -
Pte12g01054 446 Gene3D Kinase associated domain 1, KA1 310 437 - -
Pte12g01054 446 ProSiteProfiles Protein kinase domain profile. 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01054 Pte-Chr12 25803037 25808072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01054 7 443 CBL-interacting serine-threonine protein kinases AT1G01140 70.982 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte12g01054 Pkinase 1.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01054 - - qsa:O6P43_027425 709.909