Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01052 ATGCCAGATTTTGAAGGTTTTCATTTGAAGATGCCTCTGATAACTCACTATGAACCTGTTCAAGTGACACTTCAGACTGATCAAGTGAAAGATATACCATGTGGTACCAAAGGAGGTGTCATGATTAACTTCGAAAAGATTGAGGTAGTGAATCGACTTCATAAGGACTATGTGTTTGAGACACTGCTCAATTATGGGGTAGATTATGACAACACATGGATATATGACAAAATTCATCATGAGATTAATCAATTCTGCAGCTCACATTCTCTTCAACAAGTCTACATTGATGTTTTTGATCAAATTGATGAAAAGATGAAAGATGCCCTTCAAGCGGATTGCACACGCTATGCTCCTGGTATTGAGATCATCAGTGTGCGTGTAACAAAACCTAAGATTCCTGATATCATCCGGCGCAATTTTGAACAGATGGAAGAAGAACGCACCAAGGTGTTAATTGCAATTGAGAGGCAGAAAGTTGTTGAGAAAGAATCTGAGACTACGAAAAAGATGGCTATTAGTGAAGCTGAGAAGAATGCAAATGTCAGTAAGATTCTCATGGAGCAGAAGTTGATGGAGAAGGACAGTGCCAGACGCCAGCAAGAGATTGATAATCAGATGTACCTTGTTCGCGAGAAGAGTCTTGCAGATGCAGACTTTTACAGGGTGATGAAAGAGGCTGAAGTAAACAAATTGAAACTTACTCCACAATATTTGGAGCTTAGATTCATCGAAGCTATAGCTCATAATACAAAAATATTCTTTGGAGAGAAGATACCAAATATGGTCTTCGATCAGAGGCTGCTAGGAAATTTCCTACGAAACGCATCAAGACAAATGTCGAGGAGTTTGTTTGATGAGGGCATTGCTGAAGCTTAA 879 0.3925 MPDFEGFHLKMPLITHYEPVQVTLQTDQVKDIPCGTKGGVMINFEKIEVVNRLHKDYVFETLLNYGVDYDNTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQADCTRYAPGIEIISVRVTKPKIPDIIRRNFEQMEEERTKVLIAIERQKVVEKESETTKKMAISEAEKNANVSKILMEQKLMEKDSARRQQEIDNQMYLVREKSLADADFYRVMKEAEVNKLKLTPQYLELRFIEAIAHNTKIFFGEKIPNMVFDQRLLGNFLRNASRQMSRSLFDEGIAEA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01052 292 FunFam Erlin-2 isoform 1 8 146 - -
Pte12g01052 292 Gene3D Band 7 domain 8 146 IPR036013 -
Pte12g01052 292 Pfam SPFH domain / Band 7 family 5 159 IPR001107 -
Pte12g01052 292 SUPERFAMILY Band 7/SPFH domain 11 148 IPR036013 -
Pte12g01052 292 CDD SPFH_like_u3 6 266 IPR033294 GO:0005783|GO:0031625
Pte12g01052 292 PANTHER ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG 6 279 IPR033294 GO:0005783|GO:0031625
Pte12g01052 292 SMART PHB_4 2 145 IPR001107 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01052 K23341 - jre:108989372 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01052 12 25594526 25597707 Pte12g01052 12 25594526 25597707 RCT