Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01029 ATGACTTCTGGGAGTAACAAAGAGATTTGCCTTGGATGGGCTGCAAGAGATCCATCTGGTGTTCTGTCACCATATCAATTCAGTCGCAGGGCTCTTGGGAGTGATGATGTTTCAATAAAGATCACACATTGTGGAGTTTGCTATGCTGATGTAATTTGGACTAGGAATCTGCATCAAGACTCAAAGTACCCTGTAGTTCCTGGACATGAGATTGCTGGTATCGTGAAAGAGGTTGGCCCCAATGTTAAGCGCTTCAAAGTTGGTGACCACATCGGCATAGGCACTTATGTCAACTCATGCAGGGATTGCGAATATTGTAATGATAGACTAGAAGCCTATTGTGTGAAACAGGTCTTTACTTTTAATGGTGTTGATGCTGATGGGACAGTAACAAAGGGCGGTTACTCCAGCAGCATAGTTGTCCATGAAAGGTATTGTTTCATGATTCCAAAGGGCTATCCATTGGCTTCAGCAGCACCTTTACTTTGTGCTGGAATTACCGTTTATTCTCCCATGATGCGCCACAAAATGAATCAGCCTGGAAAATCTCTTGGAGTGATTGGATTGGGAGGACTTGGTCATATGGCAGTAAAATTTGGGAAAGCTTTTGGATTGAAGGTGACGGTTTTCAGCACAAGCATTTCTAAGAAAGAGGAAGCTCTCAATGACCTTGGTGCTGATCATTTTATTGTCTCGTCTGATCAAGAGCAAATGAAGGCCGCAACCAAGACTCTTGACTTTATAGTCGATGCAGCATCTGGTGATCACCCATTTGATCCATATATGTCAACGTTGAAGACTCGCGGTGTTCTAGTGCTCGTGGGGTTCCCTAGTGAAGTCAAATTTAGTCCTGCAAATCTTAATTTGGGCATGAAAACTGTCTCTGGTAGTATCACTGGCGGGACAAGAGAGATTCAAGAGATGATCAACTTCTGTGCTGCAAATAAAATACATCCAATGATAGAAGTAGTTCCAATTCAATATGCAAATGAAGCGCTTGAGAGAATGATAAAGCGGGACGTGAAATATAGATTTGTAATAGATATTGAAAGTTCACTGAAATAA 1065 0.4207 MTSGSNKEICLGWAARDPSGVLSPYQFSRRALGSDDVSIKITHCGVCYADVIWTRNLHQDSKYPVVPGHEIAGIVKEVGPNVKRFKVGDHIGIGTYVNSCRDCEYCNDRLEAYCVKQVFTFNGVDADGTVTKGGYSSSIVVHERYCFMIPKGYPLASAAPLLCAGITVYSPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSISKKEEALNDLGADHFIVSSDQEQMKAATKTLDFIVDAASGDHPFDPYMSTLKTRGVLVLVGFPSEVKFSPANLNLGMKTVSGSITGGTREIQEMINFCAANKIHPMIEVVPIQYANEALERMIKRDVKYRFVIDIESSLK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01029 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 317 IPR036291 -
Pte12g01029 354 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 184 211 IPR029752 -
Pte12g01029 354 Gene3D - 13 349 - -
Pte12g01029 354 SUPERFAMILY GroES-like 16 182 IPR011032 -
Pte12g01029 354 Gene3D - 164 319 - -
Pte12g01029 354 FunFam Uncharacterized protein 13 163 - -
Pte12g01029 354 Pfam Zinc-binding dehydrogenase 191 313 IPR013149 -
Pte12g01029 354 CDD CAD1 12 348 IPR047109 GO:0016616
Pte12g01029 354 SMART PKS_ER_names_mod 20 347 IPR020843 GO:0016491
Pte12g01029 354 PANTHER ALDEHYDE REDUCTASE 9 352 IPR047109 GO:0016616
Pte12g01029 354 FunFam Cinnamyl alcohol dehydrogenase 164 319 - -
Pte12g01029 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Pte12g01029 354 FunFam Putative cinnamyl alcohol dehydrogenase 6 320 349 - -
Pte12g01029 354 Pfam Alcohol dehydrogenase GroES-like domain 35 147 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01029 Pte-Chr12 23991692 23993494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01029 2 355 Monolignol Biosynthesis Gene Families AT1G72680 74.294 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01029 K00083 - cave:132174908 600.127