Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01012 ATGGCTCCATCGAGGAAGCCGGGAAGCGGGAATAAGCGCTTTTCTGCTTTAAATGAGGTTTCACCAGAAAAAGAAGCAAGCTATTCAAATAGAAATAAGCCGCGGAAAAAGAAATTGTCTGATAAATTAGGATCTCAATGGAGCAAAGAGGAACTAGAGCAATTCTATGAAGCGTACAGGAAACATGGTAAAGACTGGAAGAAGGTGGCTTCTGCAGTGCATAACAGATCACCTGAAATGGTGGAAGCTCTTTACATTATGAACCGGGCATACTTATCTCTACCAGAGGGAACAGCCTCAGTTGTTGGCCTCATAGCAATGATGACTGACCACTATAATGTCCTGGAAGGAAGTGACAGTGAAAGAGAGAGCAATGAGGCATCAGTATCTCAGAGGCCCCAGAAGCGCAAGCGTGGTAAAGTTCAGATTACTCCCCGAAAAGGCATCTCCCAATCTCGATCAGTTGCATCTAATGAAGGTTGCTTATATTTACTCAAAAGGGGGAAATTTGATGATGGGCAGCCTCGTGTAGTTGGTAAAAGAACACCTAGGTTCCCGGTTTGCAAAAAGGATGATAGTGAAAATTTTGTCTTGCCAAATAGAAGAGGGAAGAAACTGGATGTTGACTCTAGCAATGATGACGATGAACATGTAGCAGTTCTAGCTTTAACGGAGGGCTTCAGAAGCGTGTCTCCTCAAGTTTCTCAACCTAGTAGAAAGACAATGAATCTCAAATCCTCTCCAGCTCAGAGCTGGGAAAGAATGACTCGCGGTACTTCTGTTGAAGATCGTTCGGAAGGCTTTATAGAAAGTAGGGGAGCTGAAAATGGAGAATATGCTACAGACATAAATTCATTTATGTACATGGAAGGTGTTGGCACAGTAGAAGTTCATCGGAAGGGTAAGAGATTTTACGGGAAGAATCAGAAGGCTGAGGAATATGGAAACCATCAACTTGATGATGGTGGAGAAGCACGCAGTGGCACTGAAGAAGAGTTTAACCATAATGCTTCTAGGGAAAAGATTCGTAATGAGACTAACAAAGGAAAATGTGGAAAGTTTTCTCCACACAGTCAGAGGAAAGGAAGCAGGAAACTTTGTTTTGTAGATGACCGCTCTAACTTGGATGCTTTACACGAATTGGCTGATTTATCTCTGAAGATGCCGACATCTAAAATAGAGTCTGTTTGTTCAAGCTCGTACTGTCGTGGGCGCTTAATTATTTATCCTCTCTCCCTGTCACTCTCGTCAGAATCATCCATCCAGTTTAACAATGAGAAAGGAAACCCTGATAGTGATAGGTCCAGTTTACCTGAAGCTACGTCCACAAGTCAATACAGAGACAAAATCAAAGTAACAGGGAAAAAACAGAAGGTTCCTCGAACAATGGCTGTTGAGGGTTCAAGAAGATCCAAACTTGGAGAGGAGTCAGCTCATCATGTTACTACTGTACTTGAAACTAAAGAAAAATTTCAGAATGCTGATAAGTCATGGAAAAGAAGACGCAAGTCCTTGCCATCAAAGGCACCAGATACCAAGGTGGATTCTCCTGCAAGTGAGCTCTTGAAGAATGAGGCTATATCTGAAGAAGAGAACAAGTCAACAATGAAAGGTAAGCGTGCAAGCCAGCTTTTTACCATATCAAGGCAATCATCACCGCCGAAATCGTCAGATAGTTTATTGAGCACTGAGCAGAAAGAATTAGCACCACCAACACAAACTCCTGTGGTAACTGAAGCTTTTTTGCCAAGTAAGAGAAGAAATAGACGTAAAATTAATCCACAACGAGTATTTCATCAAAAGGAAATGAAGTCTTCTGAGAATGTCTTAGATAACCAAATTCTTAAGAACTCTCCATCTCTCCAGAGTAGAACATCTTCAGTGAAGGTAAAGCTTTCTGGTTGCCTTTCATCTAATCTGGTGCGCAAATGGTGCACTTATGAATGGTTCTATAGTGCAATTGATTATCCATGGTTTGCTAAAAGGGAGTTTATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTGACTCGCGTTGAATGGAGTGTCATTAAAAGCTCACTTGGGAAACCTCGGAGGTTTTCTGAGCACTTCCTCTGTGAGGAAAGGCATAAACTCCAACAGTATCGGGAATCTGTGAGGAAACACTATACTGACCTCCGTACTGGCGTTAGAGATGGGCTTCCAACAGATTTAGCTAGACCGCCATATGTTGGACAACGAGTCATCGCTATTCATCCAAAAACTAGAGAAATCCATGATGGAAGTGTTCTGACAGTTGACCATGACAGGTGCCGGGTTCAGTTTGACCTCCCTGAGATAGGGGTTGAATTCGTCATGGATATCGATTGCATGCCTTTGAATCCAATGGATAATGTGCCTGAAGGCCTTAGGAGAGAGAATGCTGTTGGGAAAGTTGGTCTTGTGATAAAGGAACTGCAGGTGAACGAACTTGCAGGGCACTCTAATACTTACGCTTCTGGAGGGCATTTGGAATATATAACCAGCTCATCTAGTACTCTGGTCAAGCAGGGGGAAACAAAACATTCCATATCGCAAACTAAGGCAATCACTCTTGATAACACTGGTACACAAGAAGCAACTTATAGTTCAGTTAGCACTGGGACACACTATCAAGCTAGGGAAGCAGATATTCGGGCCCTTTCTGAGTTAACTCGTGCTCTTGATAAGAAGGAAGCATTGTTGATGGAGCTTAGGAATACCAACAACTATGTATTTGAAAATCAAAATGAGTTGGAGAGCTTAAAAGATTCAGATTCTTTTAAGAAGCATTATGCCATGGTACTGGTACAGCTAAAGGAAGCCAGTGACGAGGTTTCTTCTGCATTGCTCCATTTGAGACAACGAAATAACTATACAGGAAATTGTCAGCCTCCTTGGCTGAAATCTCAAGCAAATTACCGTATTCATGATATTATTTCCAGTTCTCTGAATAGTGCTCTCATTTCAGAATCTGGATCTAGTATCACCGAAATCATCAAATCCTCCAGGTTAAAAGCAAATATTATGGTCGGTGCAGCGATTGAGGCATTTTCTTCAGTGAAAGAAGGGGAAGATGCTTTTTTGAGAATTGGGCAGGTTTTGGATTCTGTAGATAATCATCAATCAACATCCAACCCAACACAAATTGCAAGTAGAGCACAGGACCACATCGGTTCATTTGCTGTAAGTCGATCGAACTCCTGTTCATCAGAGCCTCCTCTTCTTAATAATGATGCAGCGGGTCAAAACCGGATCAATGATAGTGGAAGAAATGTTGCACAAATACCCTCAGAGCTCATCACTTCATGTGTTGCAACTTTGTTAATGATACAGACTTGTACTGAACGACAGTATCCTCCAGCTGAAGTGGCTCAGATATTAGATTCTGCAGTAACTAGCTTGCATCCATGCTGCCCTCAAAATCTTCCTATTTATAGAGAGATTCAAATGTGCATGGGGAGAATCAAAACTCAGATCCTTGCTCTGATACCAACTTAA 3510 0.4199 MAPSRKPGSGNKRFSALNEVSPEKEASYSNRNKPRKKKLSDKLGSQWSKEELEQFYEAYRKHGKDWKKVASAVHNRSPEMVEALYIMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESNEASVSQRPQKRKRGKVQITPRKGISQSRSVASNEGCLYLLKRGKFDDGQPRVVGKRTPRFPVCKKDDSENFVLPNRRGKKLDVDSSNDDDEHVAVLALTEGFRSVSPQVSQPSRKTMNLKSSPAQSWERMTRGTSVEDRSEGFIESRGAENGEYATDINSFMYMEGVGTVEVHRKGKRFYGKNQKAEEYGNHQLDDGGEARSGTEEEFNHNASREKIRNETNKGKCGKFSPHSQRKGSRKLCFVDDRSNLDALHELADLSLKMPTSKIESVCSSSYCRGRLIIYPLSLSLSSESSIQFNNEKGNPDSDRSSLPEATSTSQYRDKIKVTGKKQKVPRTMAVEGSRRSKLGEESAHHVTTVLETKEKFQNADKSWKRRRKSLPSKAPDTKVDSPASELLKNEAISEEENKSTMKGKRASQLFTISRQSSPPKSSDSLLSTEQKELAPPTQTPVVTEAFLPSKRRNRRKINPQRVFHQKEMKSSENVLDNQILKNSPSLQSRTSSVKVKLSGCLSSNLVRKWCTYEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERHKLQQYRESVRKHYTDLRTGVRDGLPTDLARPPYVGQRVIAIHPKTREIHDGSVLTVDHDRCRVQFDLPEIGVEFVMDIDCMPLNPMDNVPEGLRRENAVGKVGLVIKELQVNELAGHSNTYASGGHLEYITSSSSTLVKQGETKHSISQTKAITLDNTGTQEATYSSVSTGTHYQAREADIRALSELTRALDKKEALLMELRNTNNYVFENQNELESLKDSDSFKKHYAMVLVQLKEASDEVSSALLHLRQRNNYTGNCQPPWLKSQANYRIHDIISSSLNSALISESGSSITEIIKSSRLKANIMVGAAIEAFSSVKEGEDAFLRIGQVLDSVDNHQSTSNPTQIASRAQDHIGSFAVSRSNSCSSEPPLLNNDAAGQNRINDSGRNVAQIPSELITSCVATLLMIQTCTERQYPPAEVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01012 1169 SMART DIRP_2 650 751 IPR033471 -
Pte12g01012 1169 Pfam Myb-like DNA-binding domain 45 81 IPR001005 -
Pte12g01012 1169 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Pte12g01012 1169 PANTHER LIN-9 1 1169 IPR010561 GO:0006351|GO:0017053
Pte12g01012 1169 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 81 IPR017930 -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 421 574 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 462 509 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 1 44 - -
Pte12g01012 1169 Coils Coil 891 911 - -
Pte12g01012 1169 Pfam DIRP 649 750 IPR033471 -
Pte12g01012 1169 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 231 266 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 421 448 - -
Pte12g01012 1169 Gene3D - 11 100 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 117 133 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 231 256 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 26 44 - -
Pte12g01012 1169 SMART sant 43 91 IPR001005 -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 117 152 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 308 360 - -
Pte12g01012 1169 CDD SANT 47 81 IPR001005 -
Pte12g01012 1169 ProSiteProfiles Myb-like domain profile. 45 85 IPR001005 -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 308 350 - -
Pte12g01012 1169 MobiDBLite consensus disorder prediction 538 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01012 Pte-Chr12 21592789 21603572 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte12g01012 DIRP 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01012 - - qsa:O6P43_011108 1302.35