Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01011 ATGGGGCCAACAAAACCAACTGTTTCCAACTCTACCACCTCCTCTTCAACCATGGAGGCACCACTTCCACCACCACCTTCTTGCACAGCCCCACCTCTCTCTTCAGCTGTACAGCCTCCACTTGTGGCACCGCCGCCTCAGCCGCCGCACCTAAACTATCCTCATTCTGTTGACTCTTCTCCTGTGTCTCGCGACATGGACTCGTGGGATGAGTCATACGCTCCTACTTCTACCAATAAGCTTCGTTTCTTATGCAGCTATGGCGGTCACATAGTCCCCCGTCCGCATGACAAGTCCCTTTGTTATATTGGTGGGGTTACCCGTATGATTGTCATCGACCGCAATAGTTCACTCTCTGACCTATCTTCACGTCTCTCCTCCGAGTCTTTGCTCAACGGTGAACCGTTTATGCTCAAGTATCAGCTACCCAGTGAAGACCTGGACTCTCTCATATCTATTACTGGCGATGAAGACTTAGACAACCTGATCGATGAGTATGATCGGATGAATACAGCTAAGCCATTGGTTAAGCCTTCAAGAATCCGGCTTTTCTTGTTCGCTGCAAAACCCAAATCGTCACAATCGATTGGACCCATCTTGGATAGTTCTGCAAAGTCAGACGATTGGTTCTGGAACGCTCTCAATTCAACCGGCGTACTTAACAGACAGCTTTCTGATTCTGCTTCTGGGAATTGCTTACTGGGTCTTGATGATGACATTGTCAGCAACAAGCTAGACTCGGGTTCTAGAGACGTTGAGGCAGGATCTTTTGTCAGCGCTAAGAATGTGAAACATGGTCAAGATGTTCACTCTGTTCCGGATTCTCCTATGTTAGACACCACCTCCTCTTTTGGGTCTACTTCTTCCTCTCCTTCCTTGGCGAATTTGCCACCGATTCGTGTTCATATGAATAATGGAAATGTTAGTGGTGGCGGGGTTAGGGTGCATGACCAGAAAGTTGGGATCGAGGAGCAGTTGGCTCGGATGAGCGTTGGTGGTGGTGGCGGGTTGAAGCAAGATGAGGGTTTTACTGCTTTGTCTTCACCACCTTCAATTGCTGTTGCAGGATTATCAGGTGTGCCTATGAATGTTCCTGTGATTGTTGGTGAATATCAGAATCGGGTTTCCTCTGATGATGAGAGATCGGACCATAGCTTGACAGCTGGGTACAGTAAACAACCACCACCGCCACTTCATCTACAGCAACAGCCACAGCCACAGACACAGACACGGCAACAACCTCAGCCTCAGTCTCTACCTTTGCAATCACAGCAAAAAGCTAGTGGTGGCATTGACTTGCTTTCTCCAGATTCGGTTTCAAGCGACAATAGTATCACAAATGCTATGTCTCGCACAAAACCTTTGATGTACCTAGACCCATTTCAAGTTCAGTCTGTATCTACAAGGGTACCTAGTAATTCTGTTGATCCCAAGCTCGATATTTCTGATCCTAATGCTCGGGTTCAAATGCAACAACAGTTTCAGGACTCAGGTTATCTTTTGCAGCCCCAATATGAGCATTATCAACAAGAAACTCAGCAGCAGCAGCAGCAGCAGCAGTCATTGTTACATGATACACATTATATTCAACATCTTCCTCCTGGTTCAGTACCAATTCAAGCATATTATCCTGTATATCCTTCACAGCAGCAAACCCATCCTCAACATCTTCATCAGTTTGATCGGCAATATGAAGCACTATACTATTTGCATGCAAGACAGGCACAAGCTTATAATTTATCAGTGCAGCAGCCTAATATCAGTGAATCTGCCACTGCTTTTCCTCCCAATGGCCAAACCCCACCAAATCCTGCAATTGTGCAGCAACCTTCGTCTTTCAACCATTTGAGAAATATCCCAATTTCTAAACCAGAAGTGGTTGCAGCAACATATAGAAAAGCAGCTGCAGGAACCCAACAGCTGGTTCAAGTCCCATCCAGTCAACATCAGCAGCAATATGTTGGTTATTCTCAGATCCATCCATCTCAATCCGTTGCACCTACCTCTGTTGCAAATGCAAATTACAGTTACGAACTTTCTAATACTGTTCATAGCAAGCCATACTATACTCAAACTATGCCACCAACAATGCCTCAATAG 2100 0.46 MGPTKPTVSNSTTSSSTMEAPLPPPPSCTAPPLSSAVQPPLVAPPPQPPHLNYPHSVDSSPVSRDMDSWDESYAPTSTNKLRFLCSYGGHIVPRPHDKSLCYIGGVTRMIVIDRNSSLSDLSSRLSSESLLNGEPFMLKYQLPSEDLDSLISITGDEDLDNLIDEYDRMNTAKPLVKPSRIRLFLFAAKPKSSQSIGPILDSSAKSDDWFWNALNSTGVLNRQLSDSASGNCLLGLDDDIVSNKLDSGSRDVEAGSFVSAKNVKHGQDVHSVPDSPMLDTTSSFGSTSSSPSLANLPPIRVHMNNGNVSGGGVRVHDQKVGIEEQLARMSVGGGGGLKQDEGFTALSSPPSIAVAGLSGVPMNVPVIVGEYQNRVSSDDERSDHSLTAGYSKQPPPPLHLQQQPQPQTQTRQQPQPQSLPLQSQQKASGGIDLLSPDSVSSDNSITNAMSRTKPLMYLDPFQVQSVSTRVPSNSVDPKLDISDPNARVQMQQQFQDSGYLLQPQYEHYQQETQQQQQQQQSLLHDTHYIQHLPPGSVPIQAYYPVYPSQQQTHPQHLHQFDRQYEALYYLHARQAQAYNLSVQQPNISESATAFPPNGQTPPNPAIVQQPSSFNHLRNIPISKPEVVAATYRKAAAGTQQLVQVPSSQHQQQYVGYSQIHPSQSVAPTSVANANYSYELSNTVHSKPYYTQTMPPTMPQ* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01011 699 MobiDBLite consensus disorder prediction 374 446 - -
Pte12g01011 699 SMART PB1_new 95 188 IPR000270 GO:0005515
Pte12g01011 699 MobiDBLite consensus disorder prediction 1 71 - -
Pte12g01011 699 MobiDBLite consensus disorder prediction 265 291 - -
Pte12g01011 699 PANTHER OS05G0427100 PROTEIN-RELATED 53 551 - -
Pte12g01011 699 MobiDBLite consensus disorder prediction 403 446 - -
Pte12g01011 699 MobiDBLite consensus disorder prediction 274 291 - -
Pte12g01011 699 Gene3D - 100 187 - -
Pte12g01011 699 SUPERFAMILY CAD & PB1 domains 96 196 - -
Pte12g01011 699 CDD PB1_UP2 84 186 - -
Pte12g01011 699 MobiDBLite consensus disorder prediction 1 18 - -
Pte12g01011 699 MobiDBLite consensus disorder prediction 19 52 - -
Pte12g01011 699 Pfam PB1 domain 96 187 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01011 Pte-Chr12 21522452 21524768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01011 80 188 MAP Kinase Kinase Kinase AT3G46920 38.532 3.13e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01011 - - qsa:O6P43_025756 735.717