Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01010 ATATACGAGGTAGCGTGATTTCTTGCTCCTCTACCGGTACTTGTGGATTTAAAGGTCCAAGAAAGGGGACACCGTTTGCTGCTCAAACCGCAGCAATAAATGTTATTCGTACAGTAGCAAATCCAAATATGCAACAAGCGGAAGTCTTGATAAAGGGTCCCGGTCCCGGAAGAGATGCAGCATTAAGAGCTATTTGTCAAAGTGGAATACTATTAAGTTTCATAAGGGATGTAACCCCTATCTGGCTATACCAAGAAAGATGTACGGTCTAA 272 0.4265 IRGSVISCSSTGTCGFKGPRKGTPFAAQTAAINVIRTVANPNMQQAEVLIKGPGPGRDAALRAICQSGILLSFIRDVTPIWLYQERCTV* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01010 89 Pfam Ribosomal protein S11 2 80 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pte12g01010 89 Gene3D Ribosomal protein S11 1 86 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pte12g01010 89 SUPERFAMILY Translational machinery components 2 81 - -
Pte12g01010 89 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 86 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pte12g01010 89 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 2 81 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01010 11 80 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 35.443 4.97e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01010 K02948 - apan:17097746 124.02