Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01007 ATGGCTTATGAGGATCAACATATCTTATGCTTTTGGCTTGTGCTTCTCATAGTTCCTCTAGCCACCTTTGCTCAACATCCCCGCAATATTTCATTGGGATCTTCCCTCTCTGCATTAGATGATAGTAACTCTTTCTGGCAATCACCGTCTGGGGATTATGCTTTTGGTTTTCAAGAAATTGAAAAAGATGGTTTCTTGCTGTCTATCTGGTTCAACAAAATAGCGGAGAGAACCATAGTCTGGTCTGCCAATGGACAAAATTTAGCACCAAGAAGATCCAAACTCCAGCTCACCACAAATGGTCAGTTGCAGCTCGATGATCCAACTGGAAACCGGATATGGAATGCTAACTCTGTAGGCAGTGGAGTTGCTTACGCAGCCATGCTGGACACAGGAAATTTTGTGTTGGCTGATAACGACTCTACCTTATTGTGGGAAAGTTTTGCACAACCAACTGACACAATTTTACCTACACAAACTTTGGTTCAACCAGGCAGACTTGTTTCTCGTTACCTAGAAACAAATTACTCAATGGGAAGATTCCAGTTTTCACTACAAGGAGATGGAAACCTTGTACTGTACACTACACATTTCCCATTTGATTCTGTAAACTTCGCGTATTGGACAACTCAGATCTTCGGTAATGGCTTTGAGTTGGTCTTCAACCAAACTGGCTTTATATTCCTCAGAGCAAGCAATGGAAGTATAATCAATACTATATCTTCAACTGCCCCCTCTACTCAGGATTTCTACCATAGAGCAGTTCTTGAATATGATGGAGTTTTCAGGCACTACGTGTACCCCAAAAACAGTCCAGGAAGGTGGCCTAAGTCTTGGTCATCTGTTTCTTTCATACCTTCAAATATATGCTTGAGAATCCGAGAGGATACCGGAAGTGGAGCATGTGGGTTTAACAGCTACTGCCAATTTGATCAGAGAAAAGTCTGCCAGTGTCCAGAAGGTTATAGCTTCATTGATCCAAATGATGTAATGAAAGGATGCAAGAAGGATTTTGTTCCACAAAGCTGTGATGAAGCATTTCCAGAAACAAACCATTTTGACTTCGTTGACATGCTGAATACAGATTGGCCTCTTTCTGATTATGAACATTTTCAAAATATAGATGAGGACCAGTGCAGACAGGCTTGCCTGGCTGATTGTTTTTGTGATGTCGCCATATTCAGAAACCTTGAGTGCTGGAAGAAAAAACTCCCCCTCTCCAATGGAATAATGGATTCAACCGTCGGAGGGAAAGCTCTGGTAAAGATGAGGATTGATAATTCTACTTTGACTCATTATTCGAAGAAAGATAGAACAAATCTTTTGATAACAGAAACTGTTCTTTTGAGCAGCTCAGTGTTTCTGAATATCTTGTTCGTTGCGGCAGTCTTATTTCGGTTTCGATCTAATAACAGGAAGTCTAAGATGCTTCGACCATTCCCTTTAATAGAAGGCATGAACATCAGAAGTTTCACTTTCCAAGAGCTACGACAAGCAACAAATGAATTCAAGGAAGAAGTCGGACGTGGCGCATTTGGAACTGTGTATAAAGGAACTCTATTTGCTGAAGATAACAAGCTGATTGCAGTGAAAAGATTGGACAACGAGATACAAAACAGCGAAATGGAATTCAAAGCTGAAGTCAGTGCCATTGGCAGGACCAATCATAGAAACTTAGTCCAACTCCTTGGATTTTGTAACGAAGGGACACACAGAATACTTGTGTATGAATACATGAGCAATGGCTCCCTTGCAGACTTCCTTTTCAAAGAGCCAAGGCTAAACTGGTACCAGAGGATTCAAATTGCCGTGGGGACTGCTAGAGGACTCTTGTACTTGCATGAAGAGTGCAGCAAACAAATAATACACTGTGACATCAAGCCTCAAAATATCCTGCTTGATGATATCCGTACAGCCAAGATTTCGGACTTTGGTTTAGCAAAGCTTTTGAAGACAGACCAGACAAGGACGACAACTGCAATTAGGGGAACAAAAGGTTATGTAGCTCCTGAATGGTTTAGAAGCATGCCGATTACAACTAAGGTTGATGTGTACAGCTTTGGAATATTGTTGCTAGAGCTAGTTTGCTGCAGGAGGAATTTTGAAGGTGAGAGTGAGAGTGAGGATCAGATGATACTGACTGACTGGGCATGTGATTGCTTTAGAGATAGGATGCTTCATTTGTTGGTGAAAGAGGATGAGGAAGCAGTCCATGACATAAAAAAGGTGGAGAGGTTTGTGAAGATTGCTCTCTGGTGCAGTCAAGAGGATCCATCACTGAGACCTACGATGAACAAAGTGACACAGATGCTTGAAGGGGCTGTTGAGGTGCCAATACCTCCAGATCCTACCTCTTACATGAGTTCAGTTTGTGCTTGA 2379 0.4182 MAYEDQHILCFWLVLLIVPLATFAQHPRNISLGSSLSALDDSNSFWQSPSGDYAFGFQEIEKDGFLLSIWFNKIAERTIVWSANGQNLAPRRSKLQLTTNGQLQLDDPTGNRIWNANSVGSGVAYAAMLDTGNFVLADNDSTLLWESFAQPTDTILPTQTLVQPGRLVSRYLETNYSMGRFQFSLQGDGNLVLYTTHFPFDSVNFAYWTTQIFGNGFELVFNQTGFIFLRASNGSIINTISSTAPSTQDFYHRAVLEYDGVFRHYVYPKNSPGRWPKSWSSVSFIPSNICLRIREDTGSGACGFNSYCQFDQRKVCQCPEGYSFIDPNDVMKGCKKDFVPQSCDEAFPETNHFDFVDMLNTDWPLSDYEHFQNIDEDQCRQACLADCFCDVAIFRNLECWKKKLPLSNGIMDSTVGGKALVKMRIDNSTLTHYSKKDRTNLLITETVLLSSSVFLNILFVAAVLFRFRSNNRKSKMLRPFPLIEGMNIRSFTFQELRQATNEFKEEVGRGAFGTVYKGTLFAEDNKLIAVKRLDNEIQNSEMEFKAEVSAIGRTNHRNLVQLLGFCNEGTHRILVYEYMSNGSLADFLFKEPRLNWYQRIQIAVGTARGLLYLHEECSKQIIHCDIKPQNILLDDIRTAKISDFGLAKLLKTDQTRTTTAIRGTKGYVAPEWFRSMPITTKVDVYSFGILLLELVCCRRNFEGESESEDQMILTDWACDCFRDRMLHLLVKEDEEAVHDIKKVERFVKIALWCSQEDPSLRPTMNKVTQMLEGAVEVPIPPDPTSYMSSVCA* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01007 792 Gene3D Transferase(Phosphotransferase) domain 1 579 777 - -
Pte12g01007 792 FunFam S-receptor-like serine/threonine-protein kinase 470 578 - -
Pte12g01007 792 Pfam Protein kinase domain 503 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01007 792 ProSitePatterns Protein kinases ATP-binding region signature. 507 531 IPR017441 GO:0005524
Pte12g01007 792 PIRSF SRK 3 791 IPR024171 GO:0004674
Pte12g01007 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 149 - -
Pte12g01007 792 Gene3D - 151 271 IPR036426 -
Pte12g01007 792 CDD STKc_IRAK 507 773 - -
Pte12g01007 792 Pfam D-mannose binding lectin 78 161 IPR001480 -
Pte12g01007 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 783 - -
Pte12g01007 792 FunFam Uncharacterized protein 151 274 - -
Pte12g01007 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 194 IPR036426 -
Pte12g01007 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Pte12g01007 792 Gene3D - 29 150 IPR036426 -
Pte12g01007 792 ProSiteProfiles Protein kinase domain profile. 501 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01007 792 SMART blect_4 37 151 IPR001480 -
Pte12g01007 792 SMART serkin_6 501 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01007 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 175 275 IPR036426 -
Pte12g01007 792 CDD B_lectin 51 151 IPR001480 -
Pte12g01007 792 Gene3D Phosphorylase Kinase; domain 1 480 578 - -
Pte12g01007 792 SUPERFAMILY Protein kinase-like (PK-like) 484 772 IPR011009 -
Pte12g01007 792 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Pte12g01007 792 CDD PAN_AP_plant 339 422 - -
Pte12g01007 792 FunFam Serine/threonine-protein kinase 152 293 - -
Pte12g01007 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01007 Pte-Chr12 20026361 20029339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01007 481 773 Receptor kinase-like Gene Family AT1G60800 45.000 4.55e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte12g01007 Pkinase 6.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01007 - - qsa:O6P43_021615 1074.69