Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01006 ATGCCTACAGATATATGCTCGAGTATCCGAGAAAATTATGGAAGTGGAGCATGTGGGTACAACAGCTACTGTAAATTTGATCAGAGGAAAATCTGCCAGTGTCCAGCAGGTTATAGCTTCATTGATCCAAATGACGTGATGAAAGGATGCAAACAAGACTTTGTTCCCCAAAGCTGTAGTGAATCATCTTCAGACACACAACACTTTGATTTCTATGAGATACAGAATACTGATTGGCCTTTATCTGACTATGAACGTTTTCTGGATATGGACGAGGATTCCTGCAGACAAGCTTGCTTGGCTGATTGTTTTTGTGCTGTTGTTATATTCAGAAACCGGGGGTGCTGGAAGAAAAGGCTTCCCTTCGCAAATGGCGTAATAGATTCGGCTTTCGATGGAAAAGCTCTGGTTAAAATAAGGATTGAAAACTCTAGTTTGAGTGATTGTCCAATGAAAGATAGAAGTAGACCAAATATTGTCACAGCAGGGTTGGTGCTTTTGAGCAGCTCAGTGTTTCTGATCTTCATGTTCATTGTTGCAGTCTTATTTATATTTGGATCAATTAACAAAAAGTCTAAGATGATTCACTATTGCCCTTTAGTGGCAAGCGTGAACCTCATAAATTTCACATATGAAGAGCTAAGGAAAGCAACAAATGAGTTCAAAGAAGTTGATCGTAAAGGTACTCTATTTTCTGAGGCCATGAAAATGATTGCTGTGAAAAAAATAGTCAACATGATAGGAGAAAATGAAGCTGAATTTGAAATTGAAGTAAGTGCAATAGGCAAAACAAATCATAGAAATTTAGTCCAGCTCATAGGATTCTGCAACGAAGGGACTCATCGGATACTTGTGTATGAATACATGAGCAATGGCTCCCTTGCAGACTTCCTTTTCATAGAGCCGAGGCCAAATTGGCAGCAAAGGATTCAAATTGCTAAGGGGACTGCAAGAGGACTTTTGTACTTGCATGAAGAATGCACCAAACAGATAATACATTGTGACATCAAGCCTCAAAATATTCTGCTGGATGATATCTGTACAGCCAACATTTCAGACTTCGGATTAGCCAAACTTTTGAGGACAGACCAGACTCGAACTACTACTGCAATTAGAGGAACTAAGGGGTATGTAGCTCCTGAATGGTTTAGAAACATACCTATCACAGCTAAGGTTGATGTCTACAGCTTCGGAATATTGTTGTTGGAGCTCATATGCTGCAGGAGGAATTTTGAAGCTGAGAATGAGGATCAGATGGTACTGGCTGACTGGATATATGAATGCTTTAGAGATAGGAAGCTACATTTGTTCGTGGAAGATGAGGACGCAGTTCAAGACGTTTGTGAATATAGCTCTCTGGTGCATTCAGGCTGA 1374 0.4003 MPTDICSSIRENYGSGACGYNSYCKFDQRKICQCPAGYSFIDPNDVMKGCKQDFVPQSCSESSSDTQHFDFYEIQNTDWPLSDYERFLDMDEDSCRQACLADCFCAVVIFRNRGCWKKRLPFANGVIDSAFDGKALVKIRIENSSLSDCPMKDRSRPNIVTAGLVLLSSSVFLIFMFIVAVLFIFGSINKKSKMIHYCPLVASVNLINFTYEELRKATNEFKEVDRKGTLFSEAMKMIAVKKIVNMIGENEAEFEIEVSAIGKTNHRNLVQLIGFCNEGTHRILVYEYMSNGSLADFLFIEPRPNWQQRIQIAKGTARGLLYLHEECTKQIIHCDIKPQNILLDDICTANISDFGLAKLLRTDQTRTTTAIRGTKGYVAPEWFRNIPITAKVDVYSFGILLLELICCRRNFEAENEDQMVLADWIYECFRDRKLHLFVEDEDAVQDVCEYSSLVHSG* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01006 457 FunFam Putative receptor-like protein kinase 289 456 - -
Pte12g01006 457 SMART serkin_6 211 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01006 457 ProSiteProfiles Protein kinase domain profile. 200 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01006 457 Gene3D Transferase(Phosphotransferase) domain 1 289 453 - -
Pte12g01006 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Pte12g01006 457 Pfam Protein kinase domain 234 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g01006 457 CDD PAN_AP_plant 55 139 - -
Pte12g01006 457 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 448 - -
Pte12g01006 457 Gene3D Phosphorylase Kinase; domain 1 187 288 - -
Pte12g01006 457 SUPERFAMILY Protein kinase-like (PK-like) 203 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01006 Pte-Chr12 20023364 20024737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01006 201 441 Receptor kinase-like Gene Family AT5G16000 43.359 6.73e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte12g01006 Pkinase 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01006 - - qsa:O6P43_021615 560.836