Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00993 ATGACGTCAAAGTCCTATTCAAATCTACTTGAGCTTGCATCTGGTGAGAGTCGTACTTCTGGTAGAGTCCAGAGGAGATTACCAAGGATTATGACTGTAGCTGGGTTGATATCTGACTTTGATGATGACCCAGCAGAGAGTGTATACTCTGATCCATCTTCTTCGTCAGTCCAGCGCGATCGAATCATTATAGTTGCTAATCAGCTTCCTCTAAAGGCTCAGAGGAAATCTGATGGCGATAAAGGTTGGATTTTTAGTTGGGATGATAATTCACTTCAGCTCCAACTCAGAGATGGGTTAGGTGATGATGATATGGAGATTATTTATGTTGGCTGTCTTAAAGAAGAAATTCATCCTAATGAACAAGATGAGGTTTCTCAGATCCTGCTTGAGTCCTATAGATGCGTCCCAACTTTTCTCCCACAAGATCTATTCACCAAGTATTATCACGGTTTTTGCAAACAACAGTTATGGCCACTATTCCATTATATGTTGCCATTGTCACCAGAACTTGGTGGCAGGTTCAACAGGTCATTGTGGCAAGCATATGTGTCTGTGAATAAAATTTTTGCTGATAGGATTATGGAAGTAATTAACCCAGAAGATGATTTTGTGTGGATTCATGATTATCATCTAATGGTATTACCAACTTTTTTGAGGAAGAGATTCAATAGAGTTAAGCTTGGATTTTTCCTTCACAGTCCATTTCCCTCGTCAGAAATCTATAAGACATTGCCTATACGCGAAGAGCTCTTGAGGTCACTACTCAATTCTGATTTGATTGGATTCCATACTTTCGATTACGCTCGGCATTTCCTCTCCTGTTGTGGCCGAATGCTCGGTCTTACTTATGAATCCAAGCGGGGTTACATTGGACTTGAGTATTATGGTAGGACTGTTAGCATCAAAATTCTTCCTGTTGGTATTCACATGGGGCAGCTGCAATCAGTTATCAGTCTATCGGAAACTGAGGAAAAAATTGCGCAGCTTATGAAACAGTTTTCTGACAAAGGTAGGATAATGTTGCTTGGGGTCGATGACATGGATATCTTTAAGGGCATATGCTTGAAGCTATTAGCAATGGAACAGCTTCTTGTTCAGCATCCTGAGTGGCAAGGAAAGGTTGTATTAGTCCAGATAGCCAACCCTGCGAGAGGGCGTGGTAAAGATGTGAAAGAAGTGCAAGCTGAGACGAGAACAACTGTGAAGAGGATTAATGAGAACTTTGGCAAACCTGGTTATGAACCTGTTATTTTGATTGAAGAGCCACTCAAGTTTTATGACAGAATTGCTTACTACGTTGTTGCTGAGTGCTGTTTAGTCACTGCTGTCAGGGATGGGATGAACCTCATTCCCTATGAATATATAATCAGTCGACATGGTAACGAAAACTTGGATAAGCTGTTGGGGCTGAAGCCCTCTACTCCCAAAAAAAGTATGTTAGTTGTTTCTGAATTCATTGGCTGCTCCCCATCTTTAAGCGGAGCAATTCGAGTGAACCCATGGAATATTGATGCAGTGGCAGATGCAATGGACAATGCCTTGCAAATGGCGGACCCTGAAAAACAGCTTCGCCATGAGAAGCACTACAGATATGTTAGCACTCATGATGTTGGTTATTGGGCTCGGAGTTTCTTACAAGACTTAGAAAGGACATGTCGCGATCATTCCAGGAGAAGGAGCTGGGGAATTGGATTTGGCCTTAGTTTCAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTTGTGATGGAACACATAGTTTCGGCTTACAAAAGGACTAGAACTAGAGCAATTCTTTTAGACTATGATGGCACGTTGATGCCTCAAAATTCCATTGATAAAAGTCCAACCTCCAAAGCCGTAAAAGTCCTTAATACTTTGTGTCGAGATAAGAACAATACTGTCTTCCTTGTTAGTGCAAGAAGTCGGAAAACTCTTGATGACTGGTTTTCTTCATGTGAGAACCTAGGAATGGCTGCTGAGCATGGTTACTTTCTGAGAACGAAGCAGGATACGGAATGGGAAACATGTGGACCTGTGACAGACTGTAGTTGGAAGCAGATTGCTGAGCCAGTAATGAAGCTTTACACAGAAACAACTGACGGGTCTACGGTTGAAGACAAGGAAACTTCACTTGTATGGTGTTACGAGGATGCAGATCTGGATTTTGGTTCATGCCAGGCGAAGGAACTTCTTGATCATCTGGAAAGTGTGCTTGCTAATGAGCCAGTTACTGTTAAAAGTGGGCAGAATATGGTGGAAGTCAAACCACAGGGTGTAAGCAAGGGACTTGTGGCCAAACGACTCCTATCCGCCATGCAAGAAAGGGAAATGGCCCCAGATTTCGTTTTGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAGTAATTATCAACTCCATGGCTGGTTCATCCATAGCACCTAGAGCTGAAGTTTTTGCATGCACTGTGGGAAATAAACCTAGTAAAGCCAAGTACTATCTGGATGATAACGTCGAAATTGTTAGGTTAATGCAAGGTTTGGCTTCGGTTTCAGATCAGACAGTTTCGTTTCAGCCATGCTAG 2574 0.4227 MTSKSYSNLLELASGESRTSGRVQRRLPRIMTVAGLISDFDDDPAESVYSDPSSSSVQRDRIIIVANQLPLKAQRKSDGDKGWIFSWDDNSLQLQLRDGLGDDDMEIIYVGCLKEEIHPNEQDEVSQILLESYRCVPTFLPQDLFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRSLLNSDLIGFHTFDYARHFLSCCGRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVISLSETEEKIAQLMKQFSDKGRIMLLGVDDMDIFKGICLKLLAMEQLLVQHPEWQGKVVLVQIANPARGRGKDVKEVQAETRTTVKRINENFGKPGYEPVILIEEPLKFYDRIAYYVVAECCLVTAVRDGMNLIPYEYIISRHGNENLDKLLGLKPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDNALQMADPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRSWGIGFGLSFRVVALDPNFRKLVMEHIVSAYKRTRTRAILLDYDGTLMPQNSIDKSPTSKAVKVLNTLCRDKNNTVFLVSARSRKTLDDWFSSCENLGMAAEHGYFLRTKQDTEWETCGPVTDCSWKQIAEPVMKLYTETTDGSTVEDKETSLVWCYEDADLDFGSCQAKELLDHLESVLANEPVTVKSGQNMVEVKPQGVSKGLVAKRLLSAMQEREMAPDFVLCIGDDRSDEDMFEVIINSMAGSSIAPRAEVFACTVGNKPSKAKYYLDDNVEIVRLMQGLASVSDQTVSFQPC* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00993 857 CDD HAD_TPP 598 833 - -
Pte12g00993 857 Pfam Glycosyltransferase family 20 61 550 IPR001830 GO:0003824|GO:0005992
Pte12g00993 857 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 553 - -
Pte12g00993 857 NCBIfam trehalose-phosphatase 595 844 IPR003337 GO:0003824|GO:0005992
Pte12g00993 857 Gene3D Glycogen Phosphorylase B; 53 316 - -
Pte12g00993 857 FunFam Trehalose-6-phosphate synthase 10 727 855 - -
Pte12g00993 857 NCBIfam HAD-IIB family hydrolase 599 800 IPR006379 -
Pte12g00993 857 FunFam Alpha,alpha-trehalose-phosphate synthase 317 534 - -
Pte12g00993 857 Gene3D Glycogen Phosphorylase B; 317 534 - -
Pte12g00993 857 FunFam Trehalose-6-phosphate synthase 2 680 759 - -
Pte12g00993 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 713 - -
Pte12g00993 857 Pfam Trehalose-phosphatase 600 834 IPR003337 GO:0003824|GO:0005992
Pte12g00993 857 Gene3D - 596 724 IPR023214 -
Pte12g00993 857 Gene3D - 725 855 IPR023214 -
Pte12g00993 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 315 - -
Pte12g00993 857 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 845 IPR001830 GO:0003824|GO:0005992
Pte12g00993 857 CDD GT20_TPS 61 550 IPR001830 GO:0003824|GO:0005992
Pte12g00993 857 SUPERFAMILY HAD-like 597 844 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00993 Pte-Chr12 19118698 19122095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00993 1 850 Trehalose Biosynthesis Gene Families AT1G68020 79.490 0.0 1447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00993 K16055 - qsu:111999814 1528.46