Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00987 ATGCTGTGCCCTTTAAGTCTCTGTACTCACTATCTTTATTATCCAAACTATGCGGCATTTGCTTGTTTATCTTCTCAAGACTACAGAAATAGTCTGCAGATGAACAGTGAAGGCACCCTCTTCTCCATCTTCTCGTTGCCATGTTTTCCATTGATTTTGCGCCTTTGCATTACCTTCTCATTCTTCTCCCTCCTCTCCCAAACCGTCTTATGTTCAGTAAATCCACATTTTTCAGTCTGCGAGCCTAAATTTTGTGGTGGTTTGAAAATAAGCTTCCCTTTCTTCATCAATGGCCAACATGAACTCTTTTGTGGCTACCCTGGTTTTGATGTATACTGTGACCAAAGTGGTACCGCAAGTATCAACATATCCAATACCCTATACACCATTTTAGATATTAATTTTGACATACAGCAGCTAATAGTCTCCAATGCACTCTATTCAACCGGAGAAGCAAATATGTCAGCTTGTCTTCCTTTCACAAACAATATCACCCTTCCAAGTGACGGCAGATTCCAGTTTACTCCTAACCAAACTCACCTGTTCTTGCTCTTTGGCTGCGACCCTTCATCACTGCCACAGACCCTTCATCACTACATAGTTGGATATGGGTGCCCAGCCTCAAATAATATGAATAAAACAGGTGCACTGCTAGCATTGTCTGAGGAATCCGACACCAATATGAGCTATGGTTCTGAGAATTGCACGGTCGGAAAGGCGAATGTGCCGATGGTAACTGGTTTTGGTGGCACAAATATTAGCAGAGAGAGTGTGGTAATTAATGGGTGCTCAACCTCAATCTCAACTAATAAGAGTAAAACAGGTGCAGTGCTAGCATTGTCTGAGGAATTCGACGCCAATATGAGCTATGTTTCTGAGAATTGCAGGGACGGCAAGGTGATGAATTTGCCGATGGTAACTGGTTTTGGTGGCACAAATATTAGCAAAGAGAGTGTGGTAGCGAAGCTGAGAAATGGTTTCGGATTGAATTGGGAAGCTAGCAATTGCACTTCTTGTACAGCAAGCGGAGGGAGGTGTGGGTTTGACTCGGACACATACCATTTCCAGTGTTTCTGTAGTGATGGAACTCACGCCAATACATGCACCACTAAACCTCCTCATACTGAGAAAAAAACTTATGTAATGGTTAGAGACGTCATGGTGGCAGTAACAGCTGCTGGACTTGTCATATTTGTTATTACAGTATGGTTGTTGAGAAGGAGACTACGTCATCTCCTCCGTTACTTTTGGAGAAAACAGTCCCAGAGTCATCAAGATATTGAGGGCTTTCTTAGGAGCCATGGTCATCTTAACCTTAGAAGATATAGGTATTCGGATATTAAGAAGATAACTAATTCTTTCCGAAGCAAACTAGGGCAAGGAGGCTATGGTAGAGTGTACAAGGGAAAGTTACGAGATGGGAGTGTTGTAGCTGTGAAGGTTTTGAATGAGAAAAAAGGAAATGGAGAGGAATTTATCAATGAGGTTGCGAGCATCAGCCGAACTTCTCATGTCAACATTGTCACACTTTTAGGGTTTTGTTTTGACGGTTCCAAGAGAGCTTTGATCTATGAATTCTTACCAAATGGATCACTTGAGAAATACATATCCGAAGAGAAACCCCTGAAATCTGATTTCCGTTTAGACTGCAATACAATGTATGGGATCGCAGTTGGTGTTGCTAGAGGACTGGAATATCTGCATAGAGGATGTAACACAAGAATCTTTCATTTCGATATCAAGCCCCATAATATACTTCTAGATGAAGACTTCATTCCAAAGATATCAGACTTCGGACTTGCAAAAATCTGCCCCAGAAAAGATAGCATTGTATCAATGTTAGGTGCGAGAGGAACCGTTGGATATATTGCTCCTGAGGTATACTGCAGAAATATTGGACCTGTTTCTCATAAGTCAGATGTCTACAGCTTTGGAATGATGATTCTGGAAATGGTTGGCGGACGTAAGAAAACGGAGGCTCAAGTTGATGATACTAGTGAGATATATTTTCCAGATTGGATTTACAAGCGTCTAGAATCAAACCAGGAGCTCGCATTGGGTAACACTGAAAATGAGGGAGACAGGGAAATCATTAGGAAGATGGTAATAGTGAGCTTGTGGTGCATTCAAACCTATCCCAGAGACAGACCAACTATGGGTAGAGCGTTGGAGATGCTAGAAGGAAGCCTGCTTGCATTGCAACTTCCTTCGAGATCCGATGCTACTGCTTTGGGAAATGACTTCAGTGGATCACCTTTCCGGTATTGTTCTTCATCTTCAAAACTCCACACGAATCTTTCAAGTCAGTCATGA 2313 0.4211 MLCPLSLCTHYLYYPNYAAFACLSSQDYRNSLQMNSEGTLFSIFSLPCFPLILRLCITFSFFSLLSQTVLCSVNPHFSVCEPKFCGGLKISFPFFINGQHELFCGYPGFDVYCDQSGTASINISNTLYTILDINFDIQQLIVSNALYSTGEANMSACLPFTNNITLPSDGRFQFTPNQTHLFLLFGCDPSSLPQTLHHYIVGYGCPASNNMNKTGALLALSEESDTNMSYGSENCTVGKANVPMVTGFGGTNISRESVVINGCSTSISTNKSKTGAVLALSEEFDANMSYVSENCRDGKVMNLPMVTGFGGTNISKESVVAKLRNGFGLNWEASNCTSCTASGGRCGFDSDTYHFQCFCSDGTHANTCTTKPPHTEKKTYVMVRDVMVAVTAAGLVIFVITVWLLRRRLRHLLRYFWRKQSQSHQDIEGFLRSHGHLNLRRYRYSDIKKITNSFRSKLGQGGYGRVYKGKLRDGSVVAVKVLNEKKGNGEEFINEVASISRTSHVNIVTLLGFCFDGSKRALIYEFLPNGSLEKYISEEKPLKSDFRLDCNTMYGIAVGVARGLEYLHRGCNTRIFHFDIKPHNILLDEDFIPKISDFGLAKICPRKDSIVSMLGARGTVGYIAPEVYCRNIGPVSHKSDVYSFGMMILEMVGGRKKTEAQVDDTSEIYFPDWIYKRLESNQELALGNTENEGDREIIRKMVIVSLWCIQTYPRDRPTMGRALEMLEGSLLALQLPSRSDATALGNDFSGSPFRYCSSSSKLHTNLSSQS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00987 770 Gene3D Phosphorylase Kinase; domain 1 429 526 - -
Pte12g00987 770 ProSiteProfiles Protein kinase domain profile. 452 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00987 770 PANTHER RUST RESISTANCE KINASE LR10-RELATED 418 739 IPR045874 GO:0004672
Pte12g00987 770 ProSitePatterns Protein kinases ATP-binding region signature. 458 480 IPR017441 GO:0005524
Pte12g00987 770 SMART serkin_6 452 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00987 770 Gene3D Transferase(Phosphotransferase) domain 1 527 735 - -
Pte12g00987 770 SUPERFAMILY Protein kinase-like (PK-like) 434 727 IPR011009 -
Pte12g00987 770 Pfam Wall-associated receptor kinase galacturonan-binding 80 142 IPR025287 GO:0030247
Pte12g00987 770 FunFam PR5-like receptor kinase 527 737 - -
Pte12g00987 770 FunFam serine/threonine-protein kinase PBS1-like 419 526 - -
Pte12g00987 770 Pfam Protein kinase domain 456 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00987 770 Pfam Wall-associated receptor kinase C-terminal 279 362 IPR032872 -
Pte12g00987 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00987 Pte-Chr12 18441822 18457772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00987 311 738 Receptor kinase-like Gene Family AT5G38260 48.492 8.37e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte12g00987 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00987 - - lang:109359375 609.757