Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00963 ATGATGCGGTGTTATTATTGGAATACGTACTTTGCTATTGCAGTCACCATTGTTCTTGTGAAACTTTTGGTGCAATCGATTTTCAATAACACTGGTGGAGAAGTTGTGATCAATTACAAAGATGGAAAACATGAATTATTGGGTACTCCCACTGAGACTGCATTGTTGGAGTTTGCCTTGTCAGTTGGAGGAAATTTTCAAGCAGAGAGAAAAGCATGTGAGCTAGTTAAACTTGAGCCATTTAACTCAACAAAGAAACGAATGGGTGTAGTCCTGCAACTTCCACAAGGCGGTTTACAAGCTCATTGCAAAGGTGCTTCTGAAATAATCTTGAATAGGAGTAGGACAGATTGTAAGGAGAGTCGGAGGAGGAGGGAGAGAGGGAAAGGGGAGAGACAAAAGGGTCTGGGATTTTTTAAGGGGGTAAGGTAG 432 0.4167 MMRCYYWNTYFAIAVTIVLVKLLVQSIFNNTGGEVVINYKDGKHELLGTPTETALLEFALSVGGNFQAERKACELVKLEPFNSTKKRMGVVLQLPQGGLQAHCKGASEIILNRSRTDCKESRRRRERGKGERQKGLGFFKGVR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00963 143 MobiDBLite consensus disorder prediction 117 136 - -
Pte12g00963 143 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 19 118 IPR023299 GO:0000166
Pte12g00963 143 PANTHER CATION TRANSPORTING ATPASE 19 119 - -
Pte12g00963 143 MobiDBLite consensus disorder prediction 117 143 - -
Pte12g00963 143 Gene3D - 16 134 IPR023299 GO:0000166
Pte12g00963 143 Pfam Cation transport ATPase (P-type) 38 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00963 Pte-Chr12 15121146 15121897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00963 20 111 Primary Pumps ATPases AT4G37640 73.118 6.67e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00963 K01537 - twl:120000264 152.525