Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00952 ATGGAGCACAACATTGATAACGGGCCTCCTTCTTACTACAGTGTTCTTGGTGTCAGTTCGGATTCATCTTTAGAAGAGATAAGGCGTGCTTATCGGAAACTAGCTATGCAATGGCATCCAGATAGGTGGGCAAGAACACCTTCTTCGTTAGGTGAAGCCAAAGTTAAGTTCCAACAAATTCAAGAAGCTTATTCAGTATTATCAGACAGAAGGAAAAGAACTATGTATGATTCAGGCTTGTATAACCCAGAAGATGAAGAGGATGATGGACTTTCAGATTTTGTAGAAGAAATGGTGTCTCTAATGGCTGAAGTGAGGAAAGAGGACGAGGATTACAGCATGGAGGAGTTGCAAGCAATGTTGATGGAAATGGCTCAAGGGTTTGATTCTCCGACATTGTTTTGCAGCGGACCATCCATTTTTGATGACTCGCCTTGCTCAAAGAAGATACGCTTGGAAACAGACACAACGAACAATGGAGATGGTTCATATCTGCAAATGTTTGGTGCCAATAGATATGGAGCAACTGGATTTTGCAATTAG 543 0.418 MEHNIDNGPPSYYSVLGVSSDSSLEEIRRAYRKLAMQWHPDRWARTPSSLGEAKVKFQQIQEAYSVLSDRRKRTMYDSGLYNPEDEEDDGLSDFVEEMVSLMAEVRKEDEDYSMEELQAMLMEMAQGFDSPTLFCSGPSIFDDSPCSKKIRLETDTTNNGDGSYLQMFGANRYGATGFCN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00952 180 Pfam DnaJ domain 12 77 IPR001623 -
Pte12g00952 180 PANTHER PUTATIVE, EXPRESSED-RELATED 6 130 - -
Pte12g00952 180 SMART dnaj_3 10 72 IPR001623 -
Pte12g00952 180 CDD DnaJ 12 69 IPR001623 -
Pte12g00952 180 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Pte12g00952 180 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pte12g00952 180 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pte12g00952 180 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pte12g00952 180 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pte12g00952 180 Gene3D DnaJ domain 1 99 IPR036869 -
Pte12g00952 180 SUPERFAMILY Chaperone J-domain 11 82 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00952 Pte-Chr12 13925184 13927092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00952 12 78 C2H2 Transcription Factor Family AT1G74250 48.529 5.02e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00952 - - qsu:112022247 236.498