Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00951 ATGGAAAAGAAAGCTCCATCCACTTTTCATGAGTCCATGTCCTATGAAATCAGCTGTCATCCGCATCAAGCAATGCCAGAATCATTTCAAGAAATCCCAAGACAGGTCGAGAATTTGGGAATCATAGAGTCTGAGAACTTGGAAGATGAAGACCGTGAACTGAACAAGCAAATGGCATTAACACGGCAAGCACAGACATCTTATTCATTCATGTCGTTGGAGCTCTTGGGCACTTATGGGATTACGAAGAGACTACACGTACAGACGATCAATGAAAACAACTTGAGCAATGACTCCTGCAGCATTGATTCGCAGAAGTTTTCAGCTCAAGATATAGTGAAGATGGCTGCATCAAGGTACGTAGGGCTACATGCACAAACACATAACGATGCTTTGATGCTCGTACAGCCATTAGAATCTGCTTTTTGTCCACTCTTAGAAGGTGATATCAAAGATGTAGAACTGGTTCTCTTACTGTTAGCCGCAGCTGAAAAGGTAAGCGTTGAGCAATTTGATCATGCAAAGCAATTACTATTTTATTGTCAATATTGGATTGTATCTACAGAAGAAAATTGTGTTGGGAGAGTTATCCAGCTCTTCGTCGAAGCTCTTCAAGAGAGGATTCATAGAGAGATAAGAGGGTTGCCTTTCATGGGATCCACGAGAAACGAAGAATATGAATCGATTCAACGCGTGAATACCAATTTTAGGCTACTGTGCCATGATAAAATTCCATATAATCAAATAACGCAATTTGCTGCAATACAATCCATATTTGAACATCTCTCTTCCAAGACCAGAATCCATTTAATTGACCTTGAACCCGGAGTAGGAGTTATTTGGGCAATTTTGATGCAAGCATTAGCAGAACGAGAGCAGCCTGTTGAAATGTTGAAGGTAACTGCTTTTGGTTTAGTAGGAACAACCAAGGTAGACGAGATGACAAAGGAAAGGTTGGCAACTGTAGCTGCGTCCTTGAATATACCCTTTTCCTATGATGCAGTCTTAGTGAAGGACATGTCCGAAATCAAAGAAGAAGTGTTTGAAGTTGAGGAAGGTGAAGCTGTGGCTATATATTGTCCTCTTCTACTTAGGACATTGATCTCAAGACCATCTACCTTGGAGAACTTGATGAGAGTTCTGGCAAATCTTAAACCAACAGTCATGTTGTTGCTTGAAGTGGAAGCAAACCTTAATTCACTTTCATTTGTGACTCGCTTCACTGAGGCACTATTCCATTACAGTGTATGTTTCGATGTGTATGAAACATGCTTCGAACACAATGAGGAGTGCTGGCAGGCAATGCTTCCAATAATGCGTGCTGGGATACGAAGCATTGTTGCAATGGAAGGCAATGAAAGAACAGTGAGGAATGTAAAAATTGATGTTTGGAGAGCATTCTTTTCAAGGTTTGGAATGAAAGAAGTTGGGTTTAGTGAGTCATCCTATTACCAAGCTAACTTGGTGATGAAAAGGCTTCCTTATGGGAACCATTGCAATATTGATAAAAATGGCAAGGCTCTTGTAGTTGGTTGGAAGGGAAGCTCAATGCATTCCCTTTCAGCTTGGACATTTCTTTGA 1581 0.408 MEKKAPSTFHESMSYEISCHPHQAMPESFQEIPRQVENLGIIESENLEDEDRELNKQMALTRQAQTSYSFMSLELLGTYGITKRLHVQTINENNLSNDSCSIDSQKFSAQDIVKMAASRYVGLHAQTHNDALMLVQPLESAFCPLLEGDIKDVELVLLLLAAAEKVSVEQFDHAKQLLFYCQYWIVSTEENCVGRVIQLFVEALQERIHREIRGLPFMGSTRNEEYESIQRVNTNFRLLCHDKIPYNQITQFAAIQSIFEHLSSKTRIHLIDLEPGVGVIWAILMQALAEREQPVEMLKVTAFGLVGTTKVDEMTKERLATVAASLNIPFSYDAVLVKDMSEIKEEVFEVEEGEAVAIYCPLLLRTLISRPSTLENLMRVLANLKPTVMLLLEVEANLNSLSFVTRFTEALFHYSVCFDVYETCFEHNEECWQAMLPIMRAGIRSIVAMEGNERTVRNVKIDVWRAFFSRFGMKEVGFSESSYYQANLVMKRLPYGNHCNIDKNGKALVVGWKGSSMHSLSAWTFL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00951 526 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 105 517 IPR005202 -
Pte12g00951 526 Pfam GRAS domain family 156 524 IPR005202 -
Pte12g00951 526 ProSiteProfiles GRAS family profile. 146 524 IPR005202 -
Pte12g00951 526 Coils Coil 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00951 Pte-Chr12 13712622 13714202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00951 145 525 GRAS Transcription Factor Family AT3G03450 26.042 3.98e-42 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte12g00951 GRAS 9.8e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00951 - - qsa:O6P43_010862 441.039