Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00948 ATGCAAATGTACATACTGCTTATTTGTGCCATCCTTGTCCTATTCCTTCTGAGATTTTTCCATTCAGTACTCTGGGTTCCATGGAGAATCCAACACCATTTTCTAAAGCAAGGCATAAACGGTCCTGGCTACCGCCTGATCTTTGGGAACTCTGCTGAAATCAGGAGCCTGTTTGCAGAGGGACAATCACTTTCAATGCAATTCAATCATGATATCCTGAAAAGAGTGGTTCCCTTTTACCACACTTGGTCCAGTAAGTATGGGAAAACGTTTCTCTACTGGTTTGGGACAAAACCAAGATTGGCAATATCCGATCCAGATATGATTAAGGAGGTCTTGATGGATAAAGGTGGAAAATTGGGGAAAGTGGGATTTAATCCACTGTCTAAGTTGCTTTTTGGACAGGGACTCGTAGGACTGGATGGTGACAAATGGGTTTCTCACAGAAGCATCATAAACCAGGCGTTTCAGATGCAACATATTAAGGATTGGGTGCCTGAAATTGTAGATAGCACTAGACATATGTTGGAGAGATGGGAAGAACAAAGAGGAGGCCGTGACGAATTCGAGATCGATGTTCATGAAGAACTTCATCAGCTTTCAGCAGAAATCATATCAAGAACTGCTTTTGGAAGCAGTTTTGAAGAAGGGAAACATATATTCAGATTACAAGAGAAGCAAATGAAACTGTTTTCACTTGCAGTTAGACATGTCTATATCCCTGGATACAAATACTTGCCTACTAAGGACAACAAGGAGAGGTGGAGACTAGACAAGGAAACTAGAGAATCAATACTGAAGTTGATTACCACTAACAGTAATGCAAAGGAGAACTCAAGAAACTTACTGACTTCACTGATGTCAACCTACAAAAGTGAGCTTGGAGAAGAAGAGAAACTAGGGGTGGATGAAATTATTGATGAATGCAAGACCTTTTACTTTGCAGGAAAGGAAACAACAGCCAATTTTTTGACTTGGGCACTTCTTCTCCTTTCACTGCATCAGGAATGGCAAAGCAAGGCGAGGGAAGAAGTTCTTAGCATCTGTGGAAACAAAGGGCCTCCATCTGCAGAAAAACTACATGAACTCAAGATTGTAAGCATGATAATCAATGAAACGCTTAGACTGTACCCTCCAGCTGTGATGTTGATGAGGCAAACATCTGCAAAGGTCAAGCTGGGGAAGTTATCCATACCTGCACATACACAAATGTACTTGGCAATGACTGCTGTCCACCATGACAAAGAAATTTGGGGTGAAGATGCAAATGAGTTCAATCCATTGAGATTTAGGGAACCCCGAAAACATTTGGCGTCTTTCTTGCCATTTGGATTAGGACCTAGAATCTGCATTGGTCAAAACTTGGCAGTTACTGAGGCAAAGGTTGTCCTAGCTTTGATCATTCAAAGGTTCAGATTTGTGGTGTCTCCAACTTATGTTCATGCACCAATGCTATTCATTACTCTACAACCTCAATATGGAGCACAGATCTTATTTACCAGAAACTAA 1509 0.4122 MQMYILLICAILVLFLLRFFHSVLWVPWRIQHHFLKQGINGPGYRLIFGNSAEIRSLFAEGQSLSMQFNHDILKRVVPFYHTWSSKYGKTFLYWFGTKPRLAISDPDMIKEVLMDKGGKLGKVGFNPLSKLLFGQGLVGLDGDKWVSHRSIINQAFQMQHIKDWVPEIVDSTRHMLERWEEQRGGRDEFEIDVHEELHQLSAEIISRTAFGSSFEEGKHIFRLQEKQMKLFSLAVRHVYIPGYKYLPTKDNKERWRLDKETRESILKLITTNSNAKENSRNLLTSLMSTYKSELGEEEKLGVDEIIDECKTFYFAGKETTANFLTWALLLLSLHQEWQSKAREEVLSICGNKGPPSAEKLHELKIVSMIINETLRLYPPAVMLMRQTSAKVKLGKLSIPAHTQMYLAMTAVHHDKEIWGEDANEFNPLRFREPRKHLASFLPFGLGPRICIGQNLAVTEAKVVLALIIQRFRFVVSPTYVHAPMLFITLQPQYGAQILFTRN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00948 502 FunFam Cytochrome P450 734A1 24 502 - -
Pte12g00948 502 SUPERFAMILY Cytochrome P450 72 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 Gene3D Cytochrome P450 25 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 495 - -
Pte12g00948 502 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00948 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pte12g00948 502 Pfam Cytochrome P450 79 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00948 Pte-Chr12 13391754 13395453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00948 21 501 Cytochrome P450 AT1G75130 57.025 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00948 - - qsa:O6P43_018836 761.14