Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00938 ATGTCAGAACCAGTAAGGGCTATACCCGAGGGACTGTCTATTTTGATCCAAGTGAAAGTCTCATTCGATAGGCTCAACCGTTTCTTGCTGGATGATGAGATTAAAGCTGACAAATTCAGAAATTTAGCAACTCCAACGTTGAGAGATCTTAATTTAAAAATCAAATGGAGTCAGAAAATTGCAGTCTGCGGACCAGTTGGAGCAGGAAAATCATCTCTATTACATGCCATTCTTGGAGTAATACCAAAACTTTCAGGATCTCCAATGGATACAGCCAAATATGAGAATGCAATCAAAGCATGTGCTTTGGATAAGGACATCAGTAACTTCAGCCATGGTGATCTCACGGAGATTGGTCAGAGAGGGCTTAACTTGAGTGGAGGACAAAAGCAGAGGCTGCAACTTGCTCGAGTCGTGTACAATGATGCTGATATATATCTTCTTGATGACCCCTTCAGTGCAGTAGATGCACATACAGCAGCAGCTTTATTCAAGGTTTAA 501 0.4152 MSEPVRAIPEGLSILIQVKVSFDRLNRFLLDDEIKADKFRNLATPTLRDLNLKIKWSQKIAVCGPVGAGKSSLLHAILGVIPKLSGSPMDTAKYENAIKACALDKDISNFSHGDLTEIGQRGLNLSGGQKQRLQLARVVYNDADIYLLDDPFSAVDAHTAAALFKV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00938 166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 165 IPR027417 -
Pte12g00938 166 FunFam Multidrug resistance associated protein, putative 89 157 - -
Pte12g00938 166 Pfam ABC transporter 47 87 IPR003439 GO:0005524
Pte12g00938 166 Gene3D - 31 86 IPR027417 -
Pte12g00938 166 Gene3D - 87 166 IPR027417 -
Pte12g00938 166 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 165 - -
Pte12g00938 166 Pfam ABC transporter 115 152 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00938 Pte-Chr12 12908134 12908823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00938 47 159 Calmodulin-binding Proteins AT2G36910 32.051 3.24e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00938 - - cit:102614291 236.884