Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00932 ATGGCGTTATATAGTTCACAAGAAGAACAAGAACCCATTGTTTTTCATAATTACAGCCATAGTTACAATGAATTGGATGCTCTGTCCAGTGCCATGGATACTGTGGATGAATCCAATCCCAGAAAACGCAGGAAAATCGGAGACCCTATCATTCATCCACATCCAAATCAAACTCATATCCCTCCGATCCAATGGCGATCCCATACCTCGCACACTATCTATGCCTCCAAGCTAGTCCAAGCTCTTCGCCAAGTTCTACGCAGGAACACCACCCAGCTCAACGCCGGTCGTGATGTCCGCGACGCCGCAGACAGAGTCCTCGCCGCCACTGCTAATGGGAGGACAAGGTGGAGTCGAGCGATACTCGCGAGTCCCCACGGTGGGTCTAGGTTTCGAAGGGTAAACAAGCATAAGAAAATCAAGAAGATGACTTCATATGGACCTTTGAAGAGTAAGAAGACTGGTTTATCGGAACAGACGAGGAGGAGGAGGAAGGTACAGGACGGGGATCGAAAAAAGTCATCGGGCGTGCGTTTACAGAGCCAAGTTCGCGTTCTCAGTAAATTGGTTCCCGGTTGCCGGAAAGTCTGTCTCCCGAATCTCTTAGAAGAAGCCACAGATTATATCACAGCTTTGGAGATGCAAGTTCAATCTATGAAGGTTATCGCGGACTTGCTTGCCGGTGTTATGCCGGCCGATCGGATAAACCAACCTCTTTTATGA 723 0.4855 MALYSSQEEQEPIVFHNYSHSYNELDALSSAMDTVDESNPRKRRKIGDPIIHPHPNQTHIPPIQWRSHTSHTIYASKLVQALRQVLRRNTTQLNAGRDVRDAADRVLAATANGRTRWSRAILASPHGGSRFRRVNKHKKIKKMTSYGPLKSKKTGLSEQTRRRRKVQDGDRKKSSGVRLQSQVRVLSKLVPGCRKVCLPNLLEEATDYITALEMQVQSMKVIADLLAGVMPADRINQPLL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00932 240 MobiDBLite consensus disorder prediction 160 177 - -
Pte12g00932 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 227 IPR036638 GO:0046983
Pte12g00932 240 MobiDBLite consensus disorder prediction 143 177 - -
Pte12g00932 240 CDD bHLH_AtIBH1_like 168 223 IPR044549 GO:0006355
Pte12g00932 240 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 67 226 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00932 Pte-Chr12 12660090 12661210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00932 25 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 41.346 2.09e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00932 - - qsa:O6P43_011026 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00932 12 12660090 12661210 Pte12g00932 12 12660090 12661210 RCT