Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00928 ATGACTATATTTTATGGTGGTCAGGCTCATGTATATGATGATGTCCATCCTAACAAGGCAGATATTATAATGGCTTTGGCTGGATCAAATGGAGGGTCATGGTCCACCACGTACTCACCCAAATCTATAGAAAAAGTAGCTGGTGAAGGGGATGTGCTAAGTGGAGAAAATGAGATAGGTGTAGGGAATAAAAGAGCATATCCTCGGGAACTTCAGGGTAGATTGCCAGTAGCTGCCATCAACTCTGAGGATAGGCTAGTTACCCCATCAGGGTTACATCAGATTGAGGAGGGGCTTGTGCTCAATGTTGCTGGAGGTCTGATAATAGAGCATCCTTTAGTATTACCATACGTGAAAGAAGTGGTGGGAACAACAGATAGTGTGATGGGACTTCCCAAATCTCTCACAGAGAAACTCATAAAAGACGCCTTTTAG 435 0.4368 MTIFYGGQAHVYDDVHPNKADIIMALAGSNGGSWSTTYSPKSIEKVAGEGDVLSGENEIGVGNKRAYPRELQGRLPVAAINSEDRLVTPSGLHQIEEGLVLNVAGGLIIEHPLVLPYVKEVVGTTDSVMGLPKSLTEKLIKDAF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00928 144 SMART tify_2 1 29 IPR010399 -
Pte12g00928 144 Pfam Maf-like protein 96 142 IPR003697 GO:0047429
Pte12g00928 144 Pfam tify domain 1 28 IPR010399 -
Pte12g00928 144 ProSiteProfiles Tify domain profile. 1 29 IPR010399 -
Pte12g00928 144 Gene3D - 92 142 IPR029001 -
Pte12g00928 144 SUPERFAMILY ITPase-like 95 141 IPR029001 -
Pte12g00928 144 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 62 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00928 Pte-Chr12 12644283 12646300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00928 1 27 Tify Gene Family AT4G32570 92.593 2.45e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte12g00928 Maf 6.3e-08 CL0269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00928 - - qsa:O6P43_019399 126.331