Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00926 ATGGCAGCAAGCTCGCTGACTTCTGGAAGTGGCTCCAACTCATGTTGGACGCCAAAGCAAAACAAACAGTTTGAGAAGGCTCTGGCTGTGTATGACAAAGACACCCCATATCGCTGGCACAATGTGGCCAAGGCTGTGGGTGGAAAATCTGCTGAGGAAGTAAAGAGGCACTATGAGATTCTCTTGGAAGATCTCATGCATATAGAGGAAGATCAAATCCCCATTCCTGCTTACAGAGCTGCCAAGAGCAATGAGATGAGACGCATTGGCGATGAACAAAGGTAA 285 0.4772 MAASSLTSGSGSNSCWTPKQNKQFEKALAVYDKDTPYRWHNVAKAVGGKSAEEVKRHYEILLEDLMHIEEDQIPIPAYRAAKSNEMRRIGDEQR* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00926 94 FunFam Transcription factor SRM1 8 75 - -
Pte12g00926 94 SUPERFAMILY Homeodomain-like 14 69 IPR009057 -
Pte12g00926 94 CDD SANT 16 62 IPR001005 -
Pte12g00926 94 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Pte12g00926 94 Coils Coil 51 71 - -
Pte12g00926 94 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 8 85 IPR044636 GO:0003700
Pte12g00926 94 Gene3D - 6 75 - -
Pte12g00926 94 SMART sant 12 64 IPR001005 -
Pte12g00926 94 Pfam Myb-like DNA-binding domain 15 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00926 Pte-Chr12 12632189 12632921 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte12g00926 Myb_DNA-binding 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00926 - - qsa:O6P43_016180 135.961