Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00916 ATGGATCCACCATCTAAAATCGTCGTGCGGGAGTACAATAGGAATATCCCTCCTGGAAGTGGAGGGCTACCTTGGATTGGAGAGACCCTGCAATTCATGTCAGCCATGAACACCCATATGGGTATCTATGAATTTGTTCAGGCTCGCCGTCAAAGGTACGGAAATTGTTTCAAGACAGACATATTTGGTGAAACACACGTTTTTGTTTCGACCACACAGTCGGCGAGGATGATTCTAAACGATGACATTGGAAGATTCTCCAAGAAGTATATCAAATCAATCGCTGAGCTCGTGGGACATGAAAGCTTGCTCTGTGCTTCACGTAAGCAACACAAGCTGTTACGAAGTCGTCTTCTTCATCTGTTCTCTACCAAGAGCTTGGCAAACTTCGTTAGACTGTTCGATGAACTGATGATCGAGTCCATAACTACTTGGGACCATGGTGGAGTCGTTTTCATCCTAGACCAAGCACTGAAGATAACTTGCAAGGCTACGTGCAAAATATTGATAGGCATCGAAGGCGGCCTGGAATTAGAGATGCTACAAAAGGACGTAGCAAGTGTATGTGACGCAATGCTTGCTTTCCCACTGAGGTTACCATGGACCAGATTCTATAAAGGCCTTAAGGCCAGAAAGAGAATTACTAGCTTATTGGAAAAATTGATTTGTGAAAGAAGAAAAAGGTCTGGTGATTGCCAGGAAGATTTTCTTCAAAGCCTTTTGAGAGGGAATGGTGATTCTTGTAGCCTGACCAATGCAGAGATTCAAGATAATATCTTGGCTATGATAATTGCAGGTCAGGACACAACAGCAAGTGCAATCACTTGGATGGTGAAGTTTCTGGATGAGAATGAAGAAGTCCTTAACACATTGATGGAAGAGCAATTTAGAATCGCAAAGAACGCGAGAAATTCCTACCTCACTATGGAAGATCTGAATGAGATGCCATATGCTTCTAAGGTAGTGAAAGAGTCATTAAGGATGGCATCCGTGGTACAGTGGCTTCCAAGACTAGCATTAGCGGATTGTGAGATTGAAGGATTTAAGATCCAGAGAGGCTGGAACGTTAATGTCGATGCTCGATCCATCCATTTTGATCCTGACATCTACAGCAATCCAAACGTGTTCAATCCTTTTAGATTTGATGAGGAACCAAAATTATCTTCCAGCTTCTTAGCTTTTGGCATGGGAGGAAGGACATGCCTGGGCATGAGCATGGCCAAGATAATGATGCTTGTGTTTCTCCACCGTCTTACCACCACTTACAAGTGGAAGGTGATTGATTCAGATTCGAGCGTAAAGAAATGGGCGCTTTTCTCTAAACTAAGGAGTGGATGTCCTGTCTATTTGACATGTATCAAGCAAGTGACATCACCCCCAACTTCGAAGAGAAATTTGTGA 1401 0.4325 MDPPSKIVVREYNRNIPPGSGGLPWIGETLQFMSAMNTHMGIYEFVQARRQRYGNCFKTDIFGETHVFVSTTQSARMILNDDIGRFSKKYIKSIAELVGHESLLCASRKQHKLLRSRLLHLFSTKSLANFVRLFDELMIESITTWDHGGVVFILDQALKITCKATCKILIGIEGGLELEMLQKDVASVCDAMLAFPLRLPWTRFYKGLKARKRITSLLEKLICERRKRSGDCQEDFLQSLLRGNGDSCSLTNAEIQDNILAMIIAGQDTTASAITWMVKFLDENEEVLNTLMEEQFRIAKNARNSYLTMEDLNEMPYASKVVKESLRMASVVQWLPRLALADCEIEGFKIQRGWNVNVDARSIHFDPDIYSNPNVFNPFRFDEEPKLSSSFLAFGMGGRTCLGMSMAKIMMLVFLHRLTTTYKWKVIDSDSSVKKWALFSKLRSGCPVYLTCIKQVTSPPTSKRNL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00916 466 CDD CYP90-like 49 451 - -
Pte12g00916 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 394 403 IPR017972 GO:0005506|GO:0016705
Pte12g00916 466 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS P450 superfamily signature 320 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS P450 superfamily signature 392 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 Gene3D Cytochrome P450 8 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 SUPERFAMILY Cytochrome P450 12 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS E-class P450 group I signature 401 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS E-class P450 group I signature 391 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PRINTS E-class P450 group I signature 50 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00916 466 PANTHER CYTOCHROME P450 26 15 428 - -
Pte12g00916 466 Pfam Cytochrome P450 17 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00916 Pte-Chr12 12588194 12591053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00916 16 424 Cytochrome P450 AT1G19630 61.985 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00916 - - qsa:O6P43_018601 630.557