Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00912 ATGGACTCTGCAAATGGACATCATAAAAATCATCTGCTTCAAGACCAAGTTCAGAGAGGCATTGCTTCTCTGGCGGCCCCATCTAGTTATGGCACTGGTGGCAACCGTGAATGGCAACCCAACATCATGTTGGATGCAGGTAAGTCAAACAATTTCTTGACCCAAGACTTAGGCCACCATTGGGACTATTCTGGTAGCGGAAGTCGGCTGATGAACAAGTCTACTTCTGAATTTCTGAACAGTCCTCCAAGTATCATCGACTACCCCTTTCTCGATACAGGAAGCGACATGAGGAGCGGGCACAAGGGTTTGAATACTAATGTCTCTGAGAAGCTGCTGTTTGAGTCTTTAGCTTCTGGTCATCAGGTTTGCTCGAATGCACAAAACTGTGGTTCTTTTTCTAGTGCCGGAATGCCAAGTAGAGGAAAATTCTGCCAGATTTATCCAAGTGTGAATATTTCAAACCAGCTGAATCCAACTTTTCCAGCAATGCCAGAATCAATAGATATGAATTTACACGCTTTGGATCTCTTCAATCCCACGAGATTTACTGGCAGTTTGAGCCAACACTCACAGGATGAGCTTGGTAAATTTAGAGATCAAATGCAGCACCTGAGTAGCGCCGGTCCGTGTGGTGATGCTAATACGCAGTTCATAAATGGTATAACGGACGCAAAAAGAACCGGCATCTTATTGGAGCCAAAGGGTTCTTCATCGCCAACTGCGACGGCCAAGAAATCCAGACTGGGATCCCGTGCTTCGTGCACACCCTTCAAGGTCAGAAAAGAGAAACTGGGAGACAGAGTTGCTGCTCTTCAGCAGTTAGTGGCTCCCTTCGGCAAGACAGACACAGCTTCAGTACTTATGGAGGCTATAGGATACATCAAATTCCTTCAAAACCAGGTTGAGACGCTAAGTGTTCCATACATGAAGTCAACAGGCAACCGAAAGGGCAAAGCAATGCAAGGGGGTTCAACCGTAGAACTAGAAGATCATCACCAAGCTAAGCGAGACCTTAGAAGTCGAGGGCTTTGTCTCGTGCCAATGTCATGCATGTCTTACATAACAGGCGACAGCAACAACGCAAATTTTGGTGCGGAGATATCATAA 1110 0.4604 MDSANGHHKNHLLQDQVQRGIASLAAPSSYGTGGNREWQPNIMLDAGKSNNFLTQDLGHHWDYSGSGSRLMNKSTSEFLNSPPSIIDYPFLDTGSDMRSGHKGLNTNVSEKLLFESLASGHQVCSNAQNCGSFSSAGMPSRGKFCQIYPSVNISNQLNPTFPAMPESIDMNLHALDLFNPTRFTGSLSQHSQDELGKFRDQMQHLSSAGPCGDANTQFINGITDAKRTGILLEPKGSSSPTATAKKSRLGSRASCTPFKVRKEKLGDRVAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSTGNRKGKAMQGGSTVELEDHHQAKRDLRSRGLCLVPMSCMSYITGDSNNANFGAEIS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00912 369 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 259 309 IPR036638 GO:0046983
Pte12g00912 369 MobiDBLite consensus disorder prediction 234 250 - -
Pte12g00912 369 Gene3D - 259 315 IPR036638 GO:0046983
Pte12g00912 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 249 298 IPR011598 GO:0046983
Pte12g00912 369 CDD bHLH_AtbHLH_like 257 306 IPR045239 -
Pte12g00912 369 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 353 - -
Pte12g00912 369 FunFam Transcription factor bHLH123 family 259 321 - -
Pte12g00912 369 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00912 Pte-Chr12 12568771 12571809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00912 107 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 43.478 5.38e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00912 - - vvi:100260944 299.286