Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00899 ATGGAGAGAGATTTCATGGGGTTGAATTCTACGGATGCATTGGCAGCTTTGGTGAAGAAGGAAGTTGCTGCTAATGGATACGAAGACTCAGTTTACCTGAAGAGATCAGCTGGACAGTTTCCCTTTCCCAACAAGGTTTCTGGTCTTCCACATCTGATGTCTTTATTGGTTTCTCATGATGACAGAACTACGATGAATGTATCTGATACAATGAACACTAATGTTTTGATGCCTATATTTGGTACTGATTTTGGTTCCCAGAAATTCCACTCTGTTGGGGGATTCCAGATACTTTCAGACTCCAGCCAACAAGTCGCAGTCCCTATTGGTAACAGCTTCAAGAATCACTTTCCAGCTGCTGATCAAAATTCATCAGGCACGACCACTAAATTACATGGTGGAATATCTGTTACAGCTCCACACACAGGGGGCTTGCCGATCGGCTCGGTACCAGTAGGGATCACAGATTTCAGTGTCAAGCCTCGTTTGAGTACTTCTCAACTAACAATTTTCTATGCGGGTACTGTGAATGTTTTCGATGACATCTCACCTGAGAAGGCGCAAGCCATTATGTTGTTGGCAGGGAAGTATGTGATCTCTAGTGCATCGAAAGACAAGGTTGAGAGTAGCAGTACAAAAGTGGCTACAGATGGCGGTGTTCAGAATCAACCTATGAATTTCAACCAACTGACTGCTCCTCAGGCTCGCAGAGCATCCTTGGCTCGATTTTTGGAAAAGCGCAAGTTAAGGTCAGTAGTTAGAAAAGGTTTTTCTGTCTACACACCATAA 789 0.4385 MERDFMGLNSTDALAALVKKEVAANGYEDSVYLKRSAGQFPFPNKVSGLPHLMSLLVSHDDRTTMNVSDTMNTNVLMPIFGTDFGSQKFHSVGGFQILSDSSQQVAVPIGNSFKNHFPAADQNSSGTTTKLHGGISVTAPHTGGLPIGSVPVGITDFSVKPRLSTSQLTIFYAGTVNVFDDISPEKAQAIMLLAGKYVISSASKDKVESSSTKVATDGGVQNQPMNFNQLTAPQARRASLARFLEKRKLRSVVRKGFSVYTP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00899 262 SMART tify_2 161 196 IPR010399 -
Pte12g00899 262 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 108 252 IPR040390 -
Pte12g00899 262 ProSiteProfiles Tify domain profile. 161 196 IPR010399 -
Pte12g00899 262 Pfam Jas motif 233 250 IPR018467 -
Pte12g00899 262 Pfam tify domain 165 195 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00899 Pte-Chr12 12092025 12095278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00899 155 262 Tify Gene Family AT1G19180 40.000 6.05e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte12g00899 tify 7.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00899 K13464 - qsa:O6P43_032516 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00899 12 12092025 12095278 Pte12g00899 12 12092025 12095278 RCT