Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00888 ATGTCTAAATCACTGCTGCCATACCACATCTCTGTTGTCTGTCATGTTTTCATGCTTCTCTACCTTGCACAAAATTTGGCTGGGCAGACTGAAACTCAGAATCCCACAAGTACATACATTGTTCACTTTAGCAAAGACCAGAATAACCTTGCTTCTGCCCAGGATGGTGTCCTCTACTCATACAAGCATGTAATGAATGGATTTGCAGCAGCAATGACAGCAGCGCAACTAGAAGAAATGAAAGGACAGGAAGGGTTTGTATCAGCTAGACCTGAGAAGATTCTTTCTATGCAAACCACTCATAGTCAAGAATTTTTAGGCTTGCATATGAACTTTGGATTATGGAGTGATGCAAATTTAGGAAAGGGGGTCATTATTGGAGTTCTGGACTCGGGGATTAGCCCAGAACACCCTTCATTCTCTGATGAAAGCATGCCGCCTCCACCATCCAAATGGAGAGGAAATTGTGATTTTGAGAAGAGGTTATGCACCAACAAGCTTATTGGTGCAAGAAATTTCCTTACTAGTGATGGTGGAAAGCAACCACTGGATACAGTAGGCCATGGAACACTCATGGCCAGTGTAGCAGCTGGAAATTTTGTCAAGAATGCTAGTGTCTTTGGGAATGCTCAAGGCACAGCTTCCGGTGCGGCTCCTTATGCTCACCTAGCAATTTACAAAGTTTGCAATGAACAAGGTTGTCCTGAAAGTGCCGTATTAGCAGCAATGGACACCGCCGTTGAGGATGGGGTAGACATAATTTCCTTGTCCCTTGGTGGAGATTCTGCTCGTTACAGTGAGAGTTACATATCAATTGGAGCATTTGCTGCATTGCAGAGAGGAATCTTGGTCACCGCGCCAGCTGGAAATGGTGGTCCTATAGCAGGCACGTTGATCAATCAAGCGCCATGGCTACTGACTGTTGGAGCAAGCACCATTGACAGAAGATTTTTGGCCACTGTACAGCTTGGAAACAATGAAGAGTATGATTCGGAATCACTAGTCGACCCAAAAGATTCGAGCTTGACTTTGTCACCACTTGCATACGGTGGTTTGTGTGAACAAGGATCTCTAAGCAAAAATGATCTTAAAGGAAAAATTGTCCTATGTGATGAAAACGACAACATATCCAGCGCTGTCCAAGGGAATGAAGTGAAAAATGCCGGTGGTTCAGCCATGATTCTTGTCAACCAAATTCTTGACAACTTTAGTCTTACTGCTCTTCATTTTACCCTTCCTGCCACACACGTGAGCTCTTATGCTGGCAAAAAGATCAAGGAGTATATAAATTCAACTTCAAATCCAACCGCCACAATTCTATTTAAGGGAACTGTCATTGGTGATGCCAATGCTCCTGCATTAGCTTCCTTTTCTTCTAGAGGCCCTAACATGCAAAGCGTATACATTAACAAACCTGATGTCATTGCACCTGGGGTTAACATTTTAGCTGCATGGCCAAATTCAGTTGATAACTATACTAATTCAAAAGCAACTTTTAACATAATCTCAGGTACCTCCATATCAGCCTCTCATGTTAGTGGCATTGCAGCTTTGATAAAAAGTCGTCACCCTGATTGGTCCCCAGCTGCCATTAAATCAGCAATTATGACCACAGCTGACTTGGTAAATCTAGGAGGGAAGCCTATAGTTGATGAGACTCTTAAACCGGCAGATCCTAGTGACATCGGTGCTGAAATTTCTTTCATTGTTCAAAGTGAAGTGGAGTGCTCCGAAAGAAATGCTATTACAGAACTACAACTCAATAATCCTTCGTTCTCTTTGGCACTGGGATTAGAATCCTACAGTCAGACCATCACAAAGACTTTGACAAACGTTGGTCCTGCAAATTCAACATACACAGTGAGTGTGGAATTGAAAGAACCTTCGCCATTGAAAGTTGTAGTAAACCCAAGTGTCATTACATTCACTGAGGTGAACCAGAAGGTGACTTACAGTGTTGACTTCTCGGTATCAGAGAAAACTGATGTATTGAATACAGAAGGTCTGCTGAAATGGATTTCTGACAACCTCACTGTTACAAGTGCCATTTCTGTTGATTTTTTCTGA 2067 0.4267 MSKSLLPYHISVVCHVFMLLYLAQNLAGQTETQNPTSTYIVHFSKDQNNLASAQDGVLYSYKHVMNGFAAAMTAAQLEEMKGQEGFVSARPEKILSMQTTHSQEFLGLHMNFGLWSDANLGKGVIIGVLDSGISPEHPSFSDESMPPPPSKWRGNCDFEKRLCTNKLIGARNFLTSDGGKQPLDTVGHGTLMASVAAGNFVKNASVFGNAQGTASGAAPYAHLAIYKVCNEQGCPESAVLAAMDTAVEDGVDIISLSLGGDSARYSESYISIGAFAALQRGILVTAPAGNGGPIAGTLINQAPWLLTVGASTIDRRFLATVQLGNNEEYDSESLVDPKDSSLTLSPLAYGGLCEQGSLSKNDLKGKIVLCDENDNISSAVQGNEVKNAGGSAMILVNQILDNFSLTALHFTLPATHVSSYAGKKIKEYINSTSNPTATILFKGTVIGDANAPALASFSSRGPNMQSVYINKPDVIAPGVNILAAWPNSVDNYTNSKATFNIISGTSISASHVSGIAALIKSRHPDWSPAAIKSAIMTTADLVNLGGKPIVDETLKPADPSDIGAEISFIVQSEVECSERNAITELQLNNPSFSLALGLESYSQTITKTLTNVGPANSTYTVSVELKEPSPLKVVVNPSVITFTEVNQKVTYSVDFSVSEKTDVLNTEGLLKWISDNLTVTSAISVDFF* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00888 688 Pfam Fibronectin type-III domain 586 685 IPR041469 -
Pte12g00888 688 ProSiteProfiles Serine proteases, subtilase domain profile. 102 574 - -
Pte12g00888 688 Pfam Subtilase family 121 541 IPR000209 GO:0006508|GO:0008236
Pte12g00888 688 Pfam PA domain 356 425 IPR003137 -
Pte12g00888 688 Gene3D - 565 687 - -
Pte12g00888 688 Pfam Peptidase inhibitor I9 45 95 IPR010259 -
Pte12g00888 688 Gene3D - 314 447 - -
Pte12g00888 688 Gene3D Peptidase S8/S53 domain 123 564 IPR036852 GO:0004252|GO:0006508
Pte12g00888 688 PRINTS Subtilisin serine protease family (S8) signature 184 197 IPR015500 -
Pte12g00888 688 PRINTS Subtilisin serine protease family (S8) signature 121 140 IPR015500 -
Pte12g00888 688 PRINTS Subtilisin serine protease family (S8) signature 503 519 IPR015500 -
Pte12g00888 688 CDD Peptidases_S8_3 97 540 IPR034197 -
Pte12g00888 688 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 683 IPR045051 -
Pte12g00888 688 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 126 137 IPR023827 -
Pte12g00888 688 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 47 98 IPR037045 -
Pte12g00888 688 SUPERFAMILY Subtilisin-like 98 549 IPR036852 GO:0004252|GO:0006508
Pte12g00888 688 CDD PA_subtilisin_like 320 439 - -
Pte12g00888 688 FunFam subtilisin-like protease SBT1.5 314 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00888 Pte-Chr12 11816659 11819122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00888 57 685 Subtilisin-like Serine Gene Family AT3G14240 40.896 2.26e-155 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00888 - - qsa:O6P43_024262 716.072