Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00877 ATGTATGCAGATCATCCTATAATTCATAGAGATATAAAATCTTCCAACATTCTCCTCACGGAGAACTTCAGAGCCAAAGTGGCTGATTTTGGCTTTGCTAAACTTGTATCCGACAGTGATTTAGGTGCAACTCATGTCTCTACTCAAGTTAAAGGAACTGCAGGCTATTTGGATCCTGAGTACCTCAAAACCTACCAGCTTACTGAGAAGAGTGATGTTTATTCTTTTGGTGTTTTACTCGTTGAACTAGTCACAGGCAGACGCCCCATTGAACCAAAACTTGAATGCAAGGAGCGAATAACTCCAAAATGGGCTATGAAGAAGTTTGTGGATGGAGATGCAATCATGGTTTTGGATCCAAGAATACATAGGAATGCAGCTAATATATTGGTCCTTGAAAAGATACTTGAACTAGCTTTACAATGTTTGGCTCCTCGAAGACAACACCGGATTAGCATGAAGAGGTGTGCTGAGATCCTTTGGACAATCCGCAAAGACTATAGAGAGTTATCAGCTTCTGACTTCCGTACATTCTCCTCTAGTTCCCAAAGGAGCAGTTCCCTACAAGAGTGA 573 0.4136 MYADHPIIHRDIKSSNILLTENFRAKVADFGFAKLVSDSDLGATHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKLECKERITPKWAMKKFVDGDAIMVLDPRIHRNAANILVLEKILELALQCLAPRRQHRISMKRCAEILWTIRKDYRELSASDFRTFSSSSQRSSSLQE* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00877 190 FunFam Receptor-like protein kinase FERONIA 1 182 - -
Pte12g00877 190 Pfam Protein kinase domain 5 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00877 190 Gene3D Transferase(Phosphotransferase) domain 1 1 184 - -
Pte12g00877 190 PANTHER OS01G0750732 PROTEIN 4 182 - -
Pte12g00877 190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 7 19 IPR008271 GO:0004672|GO:0006468
Pte12g00877 190 SUPERFAMILY Protein kinase-like (PK-like) 4 164 IPR011009 -
Pte12g00877 190 SMART serkin_6 2 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00877 190 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00877 Pte-Chr12 11141039 11142041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00877 3 178 Receptor kinase-like Gene Family AT5G49760 49.171 3.53e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pte12g00877 Pkinase 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00877 - - fve:101290695 295.819