Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00865 ATGATATCCGTCTCAAAGATGGCTGCTTCATCCAAATCAGTAACGGCTTCATTAACCCATTTACGCACGCGCCCTCTAACATGTGCAGCGGCTTCTGCTTCATTTACAAGTCGGCTTGCGCCACACCCACCTGACCTTATCAAATGGGTTCGTAAGGAAGGTGGGTTTGTGCACCAAGCAGTGAAGATAGCACAAGATGACACCAATCAAGGTCTCGGGCTTGTTGCTTCTCAAGATATCCCAAAAGGGTCTGAGCTTATTTCTCTTCCATCTCATGTTCCTTTGAGATTTAGGTCTCCTCTTGAGCGGGATAGTCAAAATGATGGATTTGGGCTTCACTCTCTGTTGATTGATTTGGCTCACCAAATTCCTGAGGAACTATGGGCAATGAAACTGGGATTGAAGCTTCTGCAAGAAAGAGCAAAGGTTGAATCATTCTGGTGGCCTTACATCAGCAATCTTCCTGAAACATATAATGTGCCTATCTTTTTTCCGGGAGAGGATATAAAGAATTTGCAGTATGCTCCTGTTTTGCATCAGGTAAATAAAAGATGTCGGTTTCTTCTTGAGTTGGAGCAACAAGTCAAAGGTCTTCTTGGAAATGTGGAACCAAAAAACCATCCTTTCAATGACCAAGAAGTAGATGCATCTGCTTTTGGATGGGCAATGTCAGCAGTCTCATCTAGGGCATTTCGTTTGTACAGTAAAAAGCTTGAGGATGGAAGCCGGAAGGATATACCCATGATGCTTCCTCTTATTGATATGTGTAACCACAGCTTCAGACCAAATGCTCAAATTGTCCAGGAAGAAAAAGGGAAGGACATGAATATCCAAGTGAAGGTTATTGCTGCAACCGAAATCAAACAACGTGATTCCTTATTGCTTAGTTATGGATGCTTGAACAATGATTTGTTACTACTAGACTATGGATTTGTGATACCTTCAAATCCCTATGACTGTGTTGAGCTCAGATATGATGCTGGTCTTTTTGATGCTGCTAGTACTGCAGCTGGGGTTTCTTCACCCAGCTTTTTAGCTCCATCATCATGGCAGCGAAAGATTTTATCTCAGCTAAATTTTTTGGGGGAATCTGCTGATCTGAAGGTCACTTTAGGTGGTTCAGATATGGTAGATGGTCGATTACTTGCAGCATTGAGAATACTCCATGCCACTGACATGGAGGCAGTTGAGAAGTGTGATTTCAACACAATTATGTCTATTTCAGCTGAAGCTCCTCTTGGAGTTGCAAATGACATAGCTTCTTTTCGTGCACTTATAGCTCTCTGTGCAATTGCACTGGAACATTTCCCCACCAAAATAATGGAAGATCAAGCACTACTGAAGCAAGGTTTCGCAGATTCGACTGAGCTGGCCATCCAGTTTAGGATCCAGAAGAAATCTGTCATTATAGATGTGATGAGGAATCTAGCTAGGAGGGTTAAACAGCTCTCATCAATAGGATCGGTCACTGCATAA 1476 0.4262 MISVSKMAASSKSVTASLTHLRTRPLTCAAASASFTSRLAPHPPDLIKWVRKEGGFVHQAVKIAQDDTNQGLGLVASQDIPKGSELISLPSHVPLRFRSPLERDSQNDGFGLHSLLIDLAHQIPEELWAMKLGLKLLQERAKVESFWWPYISNLPETYNVPIFFPGEDIKNLQYAPVLHQVNKRCRFLLELEQQVKGLLGNVEPKNHPFNDQEVDASAFGWAMSAVSSRAFRLYSKKLEDGSRKDIPMMLPLIDMCNHSFRPNAQIVQEEKGKDMNIQVKVIAATEIKQRDSLLLSYGCLNNDLLLLDYGFVIPSNPYDCVELRYDAGLFDAASTAAGVSSPSFLAPSSWQRKILSQLNFLGESADLKVTLGGSDMVDGRLLAALRILHATDMEAVEKCDFNTIMSISAEAPLGVANDIASFRALIALCAIALEHFPTKIMEDQALLKQGFADSTELAIQFRIQKKSVIIDVMRNLARRVKQLSSIGSVTA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00865 491 CDD SET_LSMT 60 312 - -
Pte12g00865 491 SUPERFAMILY SET domain 41 316 IPR046341 -
Pte12g00865 491 SMART set_7 59 304 IPR001214 GO:0005515
Pte12g00865 491 Gene3D set domain protein methyltransferase, domain 1 4 311 - -
Pte12g00865 491 Pfam Rubisco LSMT substrate-binding 350 468 IPR015353 -
Pte12g00865 491 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 308 486 IPR036464 -
Pte12g00865 491 Pfam SET domain 71 298 IPR001214 GO:0005515
Pte12g00865 491 Gene3D - 314 485 IPR036464 -
Pte12g00865 491 FunFam Histone-lysine N-methyltransferase setd3 10 311 - -
Pte12g00865 491 ProSiteProfiles SET domain profile. 59 298 IPR001214 GO:0005515
Pte12g00865 491 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 34 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00865 Pte-Chr12 10868415 10872243 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte12g00865 SET 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00865 - - qsa:O6P43_025913 667.922