Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00813 ATGGAATATGGTAGCCTAGAAGAAATGCTACATGTGAATACAAAAATGAAAGACAGAAAGATCTTAGCATGGGATGAGAGGAAAAGAATTGCCAGAGGTGCTGCAAAAGGTTTGTGTTTCCTGCACCATAATTGCATACCACACATTATACACCGTGACATGAAATCCAGCAATGTACTACTTGATCATGAAATGGAAGCGAGAGTTTCTGATTTTGGAATGGCAAGACTGATAAGTGCACTTGATACACACCTCAGTGTAAGCACATTAGCAGGAACACCAGGATATGTACCCCCAGAGTACTATCAAAGTTTCAGGTGCACTGCTAAAGGCGATGTTTACTCATTTGGCGTTGTCATGTTGGAACTGCTGACCGGGAAACGACCTACAGATAAAGAGGATTTTGGTGACACAAATTTAGTTGGGTGGGTAAAAATGAAGGTACGTGAAGGGAAAGCAATGGAAGTAATAGATCCTGAGTTACTTACAGAAACTAAGGGAACGGATGAAGCAGAAGCCATAGAAGTGAAAGAAATGATCAGATATCTCAATATTACTTTGCTTTGCGTCGATGACTTCCCTTCCAGAAGACCTAATATGCTACAGGTAGTATCTATGTTGAGAGACCTCATGCCTGGATCAGGTGAAGGAAGCAGCAATAGTATATGA 669 0.4111 MEYGSLEEMLHVNTKMKDRKILAWDERKRIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWVKMKVREGKAMEVIDPELLTETKGTDEAEAIEVKEMIRYLNITLLCVDDFPSRRPNMLQVVSMLRDLMPGSGEGSSNSI* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00813 222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
Pte12g00813 222 PIRSF ILK 1 214 - -
Pte12g00813 222 SMART serkin_6 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00813 222 Pfam Protein kinase domain 3 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00813 222 FunFam serine/threonine-protein kinase BRI1-like 2 1 218 - -
Pte12g00813 222 Gene3D Transferase(Phosphotransferase) domain 1 1 217 - -
Pte12g00813 222 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00813 222 SUPERFAMILY Protein kinase-like (PK-like) 1 207 IPR011009 -
Pte12g00813 222 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00813 Pte-Chr12 9343924 9344592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00813 1 222 Receptor kinase-like Gene Family AT4G39400 61.261 1.24e-87 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte12g00813 Pkinase 2.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00813 - - qsu:112023737 407.142