Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00812 ATGTTTATCACCCTCCCTCTCTTTTTCTCATTTCGCTCCACTCTGCCAATCTATCTCAGTGAAGCTCCGCAGGAGTCTTGTGTAAACAGTGCTTTCATAATTTTTCAGAGAGAGACATATGAGAGTTTAATCATATTGGCAATGGAGTGCAACTGCAACCCAGCTCAGTTTCTGTGCCAGTTTGCTTCACTTGGCATTTTCATGGTGTATATGTTAGCAGTCCCTTTAAGTGAAGAAGCTCAAATTCCTACTTCCATCAGGACTGATACAGACGCTCTCTTCATGTTCAAAAACATGATTGAGAAAGATCCTAATGATTTTCTATCTGGATGGAAACTTAACAATAGTCCATGCGATTGGTATGGCGTTTCGTGCTCTCTTGGACGTGTTACACAGCTTAATCTTAGTGGAAGTTACCTTGTTGGCCATGTATCACTCGACCCTATGGCTTCTTTAGATATGCTATCTGTTCTAAACTTGTCTGTCAGCTATCTGTCATTAAATTCTACTAGTTTGCTTCATCTCCCACCTAGCTTGACACAGCTTGATCTTTCCTTCACTGGACTTACAGGTCTTGTTCCTGACAACCTTTTCTCCAAGTGTCCAAATCTTGTGTACGTTAGTCTTGCTTATAACAACTTAGGAGGTTCTATTCCAGAAGATTTCTTACATGGTTCTGATAAACTGCAGGGACTTGATCTTTCTTTTAACAACTTGACTGGCTCGATTTCTGATTTGAAAATTGAAAGCTCATGCAGTTCCTTGCTGCAACTTGATTTGTCTGGAAATCATTTAACAGGTTCCATTCCGACTTCCATTTCCAACTGCACAAGCTTGAAAAGCTTGAGTTTCGCCTCCAATTTGATGACTTGGGAAATTCCAAAAGCTTTGGGCCAACTAACTAGTTTGCAGAAATTGGACCTCTCCAACAACCAACTCACTGGTTGGATTCCTTCTGAACTAGGAAATGCATGTGGCTCACTTTTAGAGCTTAAGCTGGCACAAAACAACATCTCTGGATCAATTCCACAAACCTTTTCTTCATGCTCTTCGCTGCAAATTCTTGATCTCTCTAACAACAATATATCAGGCCCATTACCAGATTCCATATTTCGGAACCTTGCATCGTTGGGAGAATTGCTTTTGAGCAACAATAGTATCTCTGGGACATTTCCTGCATCTATATCATTCTGTCAGAAATTGAGGAAAGTGGATTTCAGTTCAAATAAGATTTCAGGTTTCATTCCACCAGGTATATGTCCAGGGGCATCTTCACTTGAAGAGTTGAGAATGGCAGATAATCTAATCAAAGGAGAAATCCCACCTACATTGTCTAAATGTTCACAATTGAAGACGATAGATTTCAGCCTCAACTATCTCACTGGTATAATTCCGCCAGAGCTGGGAAGACTTCAATACCTTGAACAGTTCATAGCATGGTTTAATGGCTTGGAAGGAAAGATTCCACCAGAGTTAGGAAACTGCAAGAAGCTCAAAGATCTCATTCTGAATAATAACAAGCTGAGAGGTAGCATTCCAACTGAACTGTTCAATTGCAACAATCTTGAATGGATATCACTTACAAGCAACCAACTCAGTGGCGATATCCCAAGGGAATTCGGCAGCTTGACAAGACTGGCAGTTCTGCAGCTGGGAAACAACAGCTTGACTGGAAAGATACCAGTGGAAATTGCAAATTGCAGCAGTTTGGTGTGGTTGGATTTGAATAGCAACAAGCTTAACGGGGAGATCCCTCCAAGGGTCGGCAGACAGCAAGGGGCAAAAGCTTTGAGTGGAATACTTTCAGGGAACACAATGGTTTTTGTACGTAATGTTGGAAATTCTTGCAAGGGAATTGGAGGGTTGTTGGAGTTTTCTGGAATCCGACCTGAAAGGCTATTACAGGTTCCATCATTGAGAACTTGTGATTTCACAAGAATGTATTCTGGTCCTGTTTTGAGCATGTTTACACAATACCAAACTTTGGAGTATCTTGATCTCTCTTACAATGAGTTACGAGGTAAAATCCCTGATGAATTTGGTGAAATGATTGCTCTGCAAGTCCTTGAATTGTCTCACAATCAGTTATCTGGTGAGATCCCCTCATCACTTGGCCAACTTAAGAATCTAGGTGTGTTTGATGCTTCAAACAATATATTGCAAGGTCATATCCCAGAATCATTCTCAAACTTATCATTCCTAGTACAAATTGATCTGTCTAATAATAAATTAACTGGGCGAATCCCACAAAGAGGACAGCTCAGTACACTTCCAGCAAGCCAGTTTGAAAATAATCCAGGACTTTGTGGAGTCCCTTTGCCTGAATGTCAAGATAACGTACCAACAACAAACACAATCGATGGGGCTGGAAAAGTAGGCCACAGGCCAGGACTGATATCTTGGCCTAAAAACATCATCTTGGGAACTCTTATATTCGTTGTTTTTGTATGTGTATTGGTAGTGTGGGCAATTGCGATTCGCTCAAGGCGGAAAGAAACACAGGAAATAAAGATGCTTAACAGCTTGAAGACATCTCATGCTACTACATGGGAAATTGACAAAGAGAAAGAACCACTGAGCATTAATGTGGCAACATTTCAGAGACAGTTAAGGAAGCTAAAGTTCTCACAGCTGATTGAGGCAACTAATGGCTTCTCTGCCGCAACCCTTATTGGTTCTGGAGGGTTTGGAGAAGTATTTAAGGCCACACTTAAGGATGGATCAAGTGTTGCAATTAAGAAGCTCATTCGACTGAGCTGCCAAGGTGACCGAGAATTCACGGCTGAGATGGAAACGTTAGGAAAGATCAAGCATCGGAACCTCGTACCTCTGTTGGGATATTGTAAAATAGGTGAAGAGAGGTTGCTTGTGTATGAATACATGGAATATGGTAGCCTAGAAGAAATGCTACATGTGAATACAAGAACCTCGTACCTCTGTTGGGATATTGTAAAATAG 2958 0.4111 MFITLPLFFSFRSTLPIYLSEAPQESCVNSAFIIFQRETYESLIILAMECNCNPAQFLCQFASLGIFMVYMLAVPLSEEAQIPTSIRTDTDALFMFKNMIEKDPNDFLSGWKLNNSPCDWYGVSCSLGRVTQLNLSGSYLVGHVSLDPMASLDMLSVLNLSVSYLSLNSTSLLHLPPSLTQLDLSFTGLTGLVPDNLFSKCPNLVYVSLAYNNLGGSIPEDFLHGSDKLQGLDLSFNNLTGSISDLKIESSCSSLLQLDLSGNHLTGSIPTSISNCTSLKSLSFASNLMTWEIPKALGQLTSLQKLDLSNNQLTGWIPSELGNACGSLLELKLAQNNISGSIPQTFSSCSSLQILDLSNNNISGPLPDSIFRNLASLGELLLSNNSISGTFPASISFCQKLRKVDFSSNKISGFIPPGICPGASSLEELRMADNLIKGEIPPTLSKCSQLKTIDFSLNYLTGIIPPELGRLQYLEQFIAWFNGLEGKIPPELGNCKKLKDLILNNNKLRGSIPTELFNCNNLEWISLTSNQLSGDIPREFGSLTRLAVLQLGNNSLTGKIPVEIANCSSLVWLDLNSNKLNGEIPPRVGRQQGAKALSGILSGNTMVFVRNVGNSCKGIGGLLEFSGIRPERLLQVPSLRTCDFTRMYSGPVLSMFTQYQTLEYLDLSYNELRGKIPDEFGEMIALQVLELSHNQLSGEIPSSLGQLKNLGVFDASNNILQGHIPESFSNLSFLVQIDLSNNKLTGRIPQRGQLSTLPASQFENNPGLCGVPLPECQDNVPTTNTIDGAGKVGHRPGLISWPKNIILGTLIFVVFVCVLVVWAIAIRSRRKETQEIKMLNSLKTSHATTWEIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAATLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFTAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEYMEYGSLEEMLHVNTRTSYLCWDIVK* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00812 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 247 325 - -
Pte12g00812 985 SUPERFAMILY RNI-like 123 367 - -
Pte12g00812 985 SUPERFAMILY RNI-like 292 584 - -
Pte12g00812 985 ProSiteProfiles Leucine-rich repeat profile. 351 373 IPR001611 GO:0005515
Pte12g00812 985 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 421 607 - -
Pte12g00812 985 PRINTS Leucine-rich repeat signature 300 313 - -
Pte12g00812 985 PRINTS Leucine-rich repeat signature 255 268 - -
Pte12g00812 985 Pfam Leucine rich repeat N-terminal domain 88 126 IPR013210 -
Pte12g00812 985 Gene3D Ribonuclease Inhibitor 127 776 IPR032675 -
Pte12g00812 985 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 622 780 - -
Pte12g00812 985 Pfam Brassinosteroid receptor island domain 598 657 IPR045381 -
Pte12g00812 985 Gene3D - 601 657 - -
Pte12g00812 985 SUPERFAMILY Protein kinase-like (PK-like) 861 977 IPR011009 -
Pte12g00812 985 Pfam Leucine rich repeat 255 313 IPR001611 GO:0005515
Pte12g00812 985 Pfam Leucine rich repeat 540 580 IPR001611 GO:0005515
Pte12g00812 985 Pfam Leucine rich repeat 177 239 IPR001611 GO:0005515
Pte12g00812 985 Pfam Leucine rich repeat 654 696 IPR001611 GO:0005515
Pte12g00812 985 Pfam Leucine rich repeat 325 362 IPR001611 GO:0005515
Pte12g00812 985 ProSitePatterns Protein kinases ATP-binding region signature. 891 914 IPR017441 GO:0005524
Pte12g00812 985 FunFam serine/threonine-protein kinase BRI1-like 2 846 960 - -
Pte12g00812 985 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 339 979 - -
Pte12g00812 985 ProSiteProfiles Protein kinase domain profile. 885 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00812 985 Gene3D Phosphorylase Kinase; domain 1 844 960 - -
Pte12g00812 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 326 415 - -
Pte12g00812 985 ProSiteProfiles Leucine-rich repeat profile. 228 250 IPR001611 GO:0005515
Pte12g00812 985 Pfam Protein tyrosine and serine/threonine kinase 889 977 IPR001245 GO:0004672|GO:0006468
Pte12g00812 985 SUPERFAMILY L domain-like 625 772 - -
Pte12g00812 985 SMART LRR_typ_2 731 764 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 300 324 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 543 567 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 568 591 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 683 707 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 374 398 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 349 373 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 495 519 IPR003591 -
Pte12g00812 985 SMART LRR_typ_2 252 276 IPR003591 -
Pte12g00812 985 FunFam serine/threonine-protein kinase BRI1-like 2 88 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00812 Pte-Chr12 9340870 9343894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00812 89 985 Receptor kinase-like Gene Family AT1G55610 44.703 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte12g00812 PK_Tyr_Ser-Thr 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00812 - - qsa:O6P43_032400 1361.67