Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00798 ATGTCAACCCAAGCTATAAATTCTGTACTTAAGTTGGAAGAGATACAGGGCAGAGGGAGGGGGCTGGTAGCTTCTCAGCCTCTTAAAGCTGGTCAAGTCATCCTCAAAGATTCACCGATTCTTTTGTATTCTGCTTTTCCTTTGGTCACAGAGTCCAAGGCCTCATCTACATCCTACTGTGCCAAGTGCTTCAGAAGCCTCCATCCATCATTGCCTAATTACTCATGTTCTTCATGTTCTCATATTTTTTGTAGTCCAAAGTGCCTGTCTAATGCACTCAACACATCTCACTCCCCTTGGGTATGTCAAATTTTATCTAGCCTGCTGAGTTCTACTCCGGCGATACTCCAACAACCTCCTGAACTTCAAGTCCAAGTTCGTTTCCTTGTGTCTGCATATAACCTTGCTTTGACATCATCCACAGATTTTCAGATGTTGCTTTCCCTCCATGGTTCTCCTGATGCTACCACAATTGCTTCAGCTCAGCTACTGCATTCCCTCATCTCCTGTCTCAGCCCTCTTCATCCAGTTTTTGCTCAGATTGGATTTTCAGTGGAACTTAGTGCTTCTCTGCTGGCTAAGGACAAGCATAACGCCTTCGGCTTAATGCATCCATTCTCTGAAAATGATGCCCAGAGATCTGTTAGAGCGTATGGAATTTACCCTAATGCTTCTTTTTTCAACCACGACTGCCTTCCTAATGCCTGCAGATTTGACTATCTAGATTCTGGTTCACTTGATGATGAACACAACACAGACATTATTATTCGGATGATTCATGATGTTCCCCAGGGAAGAGAGATCTGTTTGAGCTATTTTCCTGTGAATGAGAATTATGCCTGCAGGCAAAAAAGATTGATGGAAGACTATGCCTTTGCCTGTAACTGTGATAGGTGCAATGTGGAATCCAACTGGTCAGACAAGGAGGGCATTGGAGATGCTAATGATGATGAAGAGGAGTTGATGGATGAGGACCAATGTGAAGATATGTCAGCTTCAGATAATGGTACTGCCGAAGGAGATAATGATTTCCCACATGCCTATTTCTTCTTGCGGTACATGTGTGATCGAAACAACTGTTGGGGAACTTTGGCTCCCTTGCCTCCATCAGATAATACTCCATCTAATGTCCTGGAATGTAATGTCTGTGGCAAGCTGACTAGAGATGATGGATTTGATGCTGATGGTGGCAAAGATGGTCTTTCCATGGAAGGCTAA 1218 0.4376 MSTQAINSVLKLEEIQGRGRGLVASQPLKAGQVILKDSPILLYSAFPLVTESKASSTSYCAKCFRSLHPSLPNYSCSSCSHIFCSPKCLSNALNTSHSPWVCQILSSLLSSTPAILQQPPELQVQVRFLVSAYNLALTSSTDFQMLLSLHGSPDATTIASAQLLHSLISCLSPLHPVFAQIGFSVELSASLLAKDKHNAFGLMHPFSENDAQRSVRAYGIYPNASFFNHDCLPNACRFDYLDSGSLDDEHNTDIIIRMIHDVPQGREICLSYFPVNENYACRQKRLMEDYAFACNCDRCNVESNWSDKEGIGDANDDEEELMDEDQCEDMSASDNGTAEGDNDFPHAYFFLRYMCDRNNCWGTLAPLPPSDNTPSNVLECNVCGKLTRDDGFDADGGKDGLSMEG* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00798 405 Gene3D SET domain 21 299 IPR046341 -
Pte12g00798 405 ProSiteProfiles SET domain profile. 8 273 IPR001214 GO:0005515
Pte12g00798 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 395 IPR044238 -
Pte12g00798 405 SMART set_7 7 279 IPR001214 GO:0005515
Pte12g00798 405 MobiDBLite consensus disorder prediction 312 330 - -
Pte12g00798 405 MobiDBLite consensus disorder prediction 307 339 - -
Pte12g00798 405 Pfam SET domain 19 272 IPR001214 GO:0005515
Pte12g00798 405 CDD SET_SMYD 197 299 - -
Pte12g00798 405 Gene3D - 59 111 - -
Pte12g00798 405 Gene3D - 117 199 - -
Pte12g00798 405 SUPERFAMILY SET domain 6 294 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00798 Pte-Chr12 9151109 9154350 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte12g00798 SET 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00798 - - gmx:100783406 554.288